RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 NSUN5Q96P11 429 aaKnown RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 PELOQ9BRX2 385 aaKnown RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF717Q9BY31 904 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 WDR41Q9HAD4 459 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ZBTB26Q9HCK0 441 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 TINAGQ9UJW2 476 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 A0A1W2PR48 441 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 TMPRSS11DO60235 418 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 PRKRAO75569 313 aaKnown RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 OR6B1O95007 311 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 NR2F6P10588 404 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 ALOX15P16050 662 aaPredicted RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 SOX3P41225 446 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 TRAF3Q13114 568 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 GGTA1PQ4G0N0 100 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 FRG2Q64ET8 278 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 OPN5Q6U736 354 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 BNC2Q6ZN30 1099 aaPredicted RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 MILR1Q7Z6M3 343 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 MRGPRGQ86SM5 289 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 ST13P4Q8IZP2 240 aaPredicted RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF295-AS1Q8N0V1 137 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF808Q8N4W9 903 aaPredicted RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 ZFP62Q8NB50 900 aaPredicted RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 C16orf52Q8NHV5 167 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 SREK1Q8WXA9 508 aaKnown RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 PPWD1Q96BP3 646 aaKnown RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 MTBPQ96DY7 904 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 FBXL20Q96IG2 436 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 FRG2BQ96QU4 278 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 SEMA4BQ9NPR2 832 aaPredicted RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 AHSPQ9NZD4 102 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 ASB4Q9Y574 426 aa12.43□□□□□ -0.42
VCX3A-202ENST00000398729 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
VCX3A-202ENST00000398729 PRRG2O14669 202 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 RIPK2O43353 540 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 OR10H2O60403 315 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 GPR75O95800 540 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 OTCP00480 354 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 IGKV3-11P04433 115 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 RPS17P08708 135 aaKnown RBP12.42□□□□□ -0.42
VCX3A-202ENST00000398729 RHOXF2BP0C7M4 288 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 RFC3P40938 356 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 HSF1Q00613 529 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 MPEG1Q2M385 716 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 TEX35Q5T0J7 233 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 XKRXQ6PP77 449 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 ADGRD1Q6QNK2 874 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 TIFABQ6ZNK6 161 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 RTL4Q6ZR62 310 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 GOLM1Q8NBJ4 401 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 OR4F6Q8NGB9 312 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 NUBPLQ8TB37 319 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 SGCZQ96LD1 299 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 RHOXF2Q9BQY4 288 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 CNPPD1Q9BV87 410 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 ELOVL6Q9H5J4 265 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 RUBCNLQ9H714 662 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 MEMO1Q9Y316 297 aa12.42□□□□□ -0.42
VCX3A-202ENST00000398729 IQANK1A0A1B0GTG1 560 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 GLOD5A6NK44 160 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 A8MT66 165 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 ACOT7O00154 380 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 HS6ST1O60243 411 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 CDC40O60508 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
VCX3A-202ENST00000398729 AIFM1O95831 613 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 GBAP04062 536 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 SNRPB2P08579 225 aaKnown RBP12.41□□□□□ -0.42
VCX3A-202ENST00000398729 TAC1P20366 129 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 GCAP28676 217 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 PTGER1P34995 402 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 SMSP52788 366 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 CDH13P55290 713 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 PLGLB1Q02325 96 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 ASPHQ12797 758 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 TESK1Q15569 626 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF630Q2M218 657 aaPredicted RBP12.41□□□□□ -0.42
VCX3A-202ENST00000398729 SPRED3Q2MJR0 410 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF750Q32MQ0 723 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 SGO1Q5FBB7 561 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 PIGGQ5H8A4 983 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 OR52E8Q6IFG1 317 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 DGAT2L6Q6ZPD8 337 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 GK5Q6ZS86 529 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 PAGE2Q7Z2X7 111 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 LCA5Q86VQ0 697 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 CNPY4Q8N129 248 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 EID3Q8N140 333 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 TMEM151AQ8N4L1 468 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 MYRIPQ8NFW9 859 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 OR2M7Q8NG81 312 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 SLC22A8Q8TCC7 542 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF483Q8TF39 744 aaPredicted RBP12.41□□□□□ -0.42
VCX3A-202ENST00000398729 RIT1Q92963 219 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 C1QTNF3Q9BXJ4 246 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 DEPPQ9NTK1 212 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 ADAM29Q9UKF5 820 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 SNX6Q9UNH7 406 aa12.41□□□□□ -0.42
VCX3A-202ENST00000398729 GTF3C1Q12789 2109 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms