RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 DMRT3Q9NQL9 472 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 FAM221BA6H8Z2 402 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 LATO43561 262 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 GABBR2O75899 941 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 DCTP40126 519 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 SLC35F1Q5T1Q4 408 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 NAGSQ8N159 534 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR2A12Q8NGT7 310 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 PROKR1Q8TCW9 393 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF675Q8TD23 568 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 WDR83Q9BRX9 315 aaKnown RBP13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 ANKRD60Q9BZ19 345 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 MKLN1Q9UL63 735 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 IQCMA0A1B0GVH7 501 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF879B4DU55 563 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 J3QLW9 94 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 CDRT1O95170 752 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF19P17023 458 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 TAS2R43P59537 309 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 GABARAPL2P60520 117 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 RPS3AP61247 264 aaKnown RBP13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 GID4Q8IVV7 300 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 C7orf57Q8NEG2 295 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 SMPDL3BQ92485 455 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 MAL2Q969L2 176 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 DSN1Q9H410 356 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 ERVK-18Q9QC07 812 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 C19orf25Q9UFG5 118 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 HYKKA2RU49 373 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 E2F3O00716 465 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ADAP00813 363 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 DRD1P21728 446 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 F8A1P23610 371 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 EDNRAP25101 427 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SLC15A1P46059 708 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 CPZQ66K79 652 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF367Q7RTV3 350 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 Q8N9G6 341 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR2T33Q8NG76 320 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR2L2Q8NH16 312 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 NEK7Q8TDX7 302 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 RELTQ969Z4 430 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 OMA1Q96E52 524 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SLC29A1Q99808 456 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SP140LQ9H930 580 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ANKMY1Q9P2S6 941 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 GMEB2Q9UKD1 530 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ECM29Q5VYK3 1845 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 TCRBV3S1A0A5B6 114 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 HIDE1A8MVS5 230 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF670-ZNF695F2Z2N8 137 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 RNASET2O00584 256 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 CSTAP01040 98 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 C1SP09871 688 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ALDOCP09972 364 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 FUT4P22083 530 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 VBP1P61758 197 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 CBLBQ13191 982 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 PJA1Q8NG27 643 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 HCAR2Q8TDS4 363 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF480Q8WV37 535 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 PPP1R14BQ96C90 147 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 APOOQ9BUR5 198 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZBP1Q9H171 429 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF726A6NNF4 738 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 BLOC1S5-TXNDC5H3BN57 136 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SEMA3DO95025 777 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 MT-ND5P03915 603 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 RABIFP47224 123 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF542PQ5EBM4 170 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 OTUD1Q5VV17 481 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 RPL13AP3Q6NVV1 102 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 PGM2L1Q6PCE3 622 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SERPINA11Q86U17 422 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 TMED9Q9BVK6 235 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SLC22A4Q9H015 551 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 MMP27Q9H306 513 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 KCNK12Q9HB15 430 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 LOXHD1Q8IVV2 1947 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SLC1A7O00341 560 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 LSM1O15116 133 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 HMGA1P17096 107 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 GSTM2P28161 218 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SIM1P81133 766 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 CDK3Q00526 305 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 RPL6Q02878 288 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 CSTF1Q05048 431 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 SLC3A1Q07837 685 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 CD47Q08722 323 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 TMEM164Q5U3C3 297 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 PITHD1Q9GZP4 211 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 DCAF13Q9NV06 445 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 PCDHGB5Q9Y5G0 923 aa13.57□□□□□ -0.24
PCDHGA11-201ENST00000398587 A0A0G2JPF8 293 aa13.56□□□□□ -0.24
PCDHGA11-201ENST00000398587 HNRNPCL3B7ZW38 293 aa13.56□□□□□ -0.24
PCDHGA11-201ENST00000398587 GSTT2BP0CG30 244 aa13.56□□□□□ -0.24
PCDHGA11-201ENST00000398587 HNRNPCL4P0DMR1 293 aa13.56□□□□□ -0.24
PCDHGA11-201ENST00000398587 SLC2A2P11168 524 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA11-201ENST00000398587 IGFBP6P24592 240 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms