RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SP140Q13342 867 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 CLVS2Q5SYC1 327 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 ANXA8L1Q5VT79 327 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.22■□□□□ 0.031e-10■■□□□ 13.8
CHMP1A-201ENST00000397901 C16orf62Q7Z3J2 963 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 TTLQ8NG68 377 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 SCAMP4Q969E2 229 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 ZC3HAV1LQ96H79 300 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 IGSF21Q96ID5 467 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 LYSMD1Q96S90 227 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 C19orf43Q9BQ61 176 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 ZDHHC6Q9H6R6 413 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 MCUBQ9NWR8 336 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 COL4A6Q14031 1691 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 ARHGEF33A8MVX0 844 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 ASMTP46597 345 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 SCARB2Q14108 478 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 PLEKHS1Q5SXH7 462 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 LINC00518Q8N0U6 118 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 UBE2J2Q8N2K1 259 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 OR5AK3PQ8NH89 298 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 WDR36Q8NI36 951 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 KLHL6Q8WZ60 621 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 AKAP1Q92667 903 aaKnown RBP eCLIP15.22■□□□□ 0.036e-8■■■■■ 44.5
CHMP1A-201ENST00000397901 VOPP1Q96AW1 172 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 DACT3Q96B18 629 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 C11orf24Q96F05 449 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 PPIL3Q9H2H8 161 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 EXOSC4Q9NPD3 245 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 B4GALT6Q9UBX8 382 aa15.22■□□□□ 0.03
CHMP1A-201ENST00000397901 FABP12A6NFH5 140 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 FAM227AF5H4B4 570 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 SLC16A5O15375 505 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 ABLIM3O94929 683 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 C6orf47O95873 294 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 GPC1P35052 558 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 CSNK1DP48730 415 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 MVDP53602 400 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 PTGES3Q15185 160 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 GCNT6Q5T4J0 391 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 KIAA1324Q6UXG2 1013 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 DNAJB7Q7Z6W7 309 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 GPAT4Q86UL3 456 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 HUS1BQ8NHY5 278 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 CLP1Q92989 425 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 KIAA1143Q96AT1 154 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 SAMD11Q96NU1 681 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 OR4K3Q96R72 315 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 SLC35A5Q9BS91 424 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 SUV39H2Q9H5I1 410 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 ZNF282Q9UDV7 671 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 MAP4K5Q9Y4K4 846 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 ANAPC1Q9H1A4 1944 aa15.21■□□□□ 0.03
CHMP1A-201ENST00000397901 ATG13O75143 517 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 FHP07954 510 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 SRCP12931 536 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 BDKRB1P46663 353 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 SPINT3P49223 89 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 PTPN5P54829 565 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 C21orf58P58505 322 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 RPS13P62277 151 aaKnown RBP15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 PCDH1Q08174 1060 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 MZT2BQ6NZ67 158 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 AGTRAPQ6RW13 159 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 GDPGP1Q6ZNW5 385 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 DEFB128Q7Z7B8 93 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 ADGRG3Q86Y34 549 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 ZNF366Q8N895 744 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 DUSP18Q8NEJ0 188 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 CIDECQ96AQ7 238 aaPredicted RBP15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 TAPBPLQ9BX59 468 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 CDCA4Q9BXL8 241 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 SNTG1Q9NSN8 517 aa15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 EXO1Q9UQ84 846 aaKnown RBP15.21■□□□□ 0.02
CHMP1A-201ENST00000397901 PRAMEF33A0A0G2JMD5 474 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 A0A1W2PRG6 482 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 H3BM21 787 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 SAP18O00422 153 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 PRRG1O14668 218 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 UGDHO60701 494 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 PRAMEF10O60809 474 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 PREPP48147 710 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 CDC42P60953 191 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 SNRPD1P62314 119 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 MC1RQ01726 317 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 TSTA3Q13630 321 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 SSX1Q16384 188 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 PYDC2Q56P42 97 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 GRHL2Q6ISB3 625 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 Q6ZNB5 142 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 PTCHD4Q6ZW05 846 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 OTOP2Q7RTS6 562 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 LURAP1LQ8IV03 231 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 LILRA3Q8N6C8 439 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 AQP11Q8NBQ7 271 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 OR7G3Q8NG95 312 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 OR8K5Q8NH50 307 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 ZNF461Q8TAF7 563 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 SCPEP1Q9HB40 452 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms