RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SLC35A5Q9BS91 424 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 NDC1Q9BTX1 674 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 PCDHAC1Q9H158 963 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 CDC14AQ9UNH5 594 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 SRPK3Q9UPE1 567 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 ZNF780BQ9Y6R6 833 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 A0A1W2PS29 197 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 FAM220BPB1ANY3 271 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 MPIP34949 423 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 CDK9P50750 372 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 NCBP2P52298 156 aaKnown RBP eCLIP18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 OR4D2P58180 307 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 VAC14Q08AM6 782 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 C16orf72Q14CZ0 275 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 PHF19Q5T6S3 580 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 LCN8Q6JVE9 175 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 RHBDD2Q6NTF9 364 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 TTLL10Q6ZVT0 673 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 PIP4P1Q86T03 277 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 BMPERQ8N8U9 685 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 OR2T12Q8NG77 320 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 NEURL3Q96EH8 262 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 SPATA9Q9BWV2 254 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 GPATCH2Q9NW75 528 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 ACTR3BQ9P1U1 418 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 HCN3Q9P1Z3 774 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 BCAP29Q9UHQ4 241 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 RARRES3Q9UL19 164 aa18.33■□□□□ 0.52
PDLIM2-205ENST00000397761 CFAP54Q96N23 3096 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 A0A1B0GX78 115 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 FAM227AF5H4B4 570 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 FGF17O60258 216 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 GPR75O95800 540 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 IFI6P09912 130 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 CPMP14384 443 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 XKP51811 444 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 IGLV3-21P80748 117 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 HSPB3Q12988 150 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 DSG2Q14126 1118 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 RGNQ15493 299 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 ZNF750Q32MQ0 723 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 SAXO2Q658L1 398 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 IFNEQ86WN2 208 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 ZNF595Q8IYB9 648 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 LRRC25Q8N386 305 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 AGBL5Q8NDL9 886 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 OR52N2Q8NGI0 321 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 SFXN5Q8TD22 340 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 ANKRD9Q96BM1 317 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 REXO5Q96IC2 774 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 OR6C1Q96RD1 312 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 USP22Q9UPT9 525 aa18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 MRPS33Q9Y291 106 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-205ENST00000397761 SPTBN4Q9H254 2564 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 KRT75O95678 551 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 ATP1B1P05026 303 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 C8orf89P0DMQ9 161 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 FGF5P12034 268 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 BMP2P12643 396 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 PPP2R1BP30154 601 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 FEN1P39748 380 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 E2F1Q01094 437 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 FOLH1Q04609 750 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 FADDQ13158 208 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 COL9A2Q14055 689 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 IL11RAQ14626 422 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 AASDHQ4L235 1098 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 PRAMEF17Q5VTA0 474 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 RBM44Q6ZP01 1051 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 DHFR2Q86XF0 187 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 CCDC116Q8IYX3 515 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 CLEC4FQ8N1N0 589 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 TNIP2Q8NFZ5 429 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 OR51Q1Q8NH59 317 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 FAM120BQ96EK7 910 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 RAD21L1Q9H4I0 556 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 SEMA3GQ9NS98 782 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 NTMQ9P121 344 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 DHCR7Q9UBM7 475 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 CLCA2Q9UQC9 943 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 MAP4K5Q9Y4K4 846 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 CLDN16Q9Y5I7 305 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 SNX13Q9Y5W8 968 aa18.31■□□□□ 0.52
PDLIM2-205ENST00000397761 RNF103-CHMP3A0A140T963 221 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 ARPC2O15144 300 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 HYAL3O43820 417 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 B4GALT2O60909 372 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 KCNK5O95279 499 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 ONECUT2O95948 504 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 PORP16435 677 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 IL10P22301 178 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 CSTF2P33240 577 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 MAGEA8P43361 318 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 CCT3P49368 545 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 MAT1AQ00266 395 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 ADRM1Q16186 407 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 GLRX5Q86SX6 157 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 MICU2Q8IYU8 434 aa18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 BHLHE22Q8NFJ8 381 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-205ENST00000397761 MOAP1Q96BY2 351 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms