RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 NANOGNBQ7Z5D8 188 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 OR2L13Q8N349 312 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 KBTBD8Q8NFY9 601 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 OR9Q1Q8NGQ5 310 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CTHRC1Q96CG8 243 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 TREX2Q9BQ50 279 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CXorf21Q9HAI6 301 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 FGF22Q9HCT0 170 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 MRPS30Q9NP92 439 aaKnown RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 WSB2Q9NYS7 404 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 SPTBN4Q9H254 2564 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 LRRC14BA6NHZ5 514 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 NCF1BA6NI72 391 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 NCF1CA8MVU1 366 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 IGFBP5P24593 272 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CCR10P46092 362 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 C19orf48Q6RUI8 117 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 BAHD1Q8TBE0 780 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 MRPL48Q96GC5 212 aaKnown RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 TRAF4Q9BUZ4 470 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 MTHFD2LQ9H903 347 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 PRDM7Q9NQW5 492 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 UGT2A1Q9Y4X1 527 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 ASB4Q9Y574 426 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 DPPA5A6NC42 116 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CNOT3O75175 753 aaKnown RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CSF2P04141 144 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 EN2P19622 333 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CSTF2P33240 577 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 PREPP48147 710 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 STARD6P59095 220 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 ASPGQ86U10 573 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 C12orf40Q86WS4 652 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CREB3L4Q8TEY5 395 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CYB5D2Q8WUJ1 264 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 ACOT11Q8WXI4 607 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 RORBQ92753 470 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 COL21A1Q96P44 957 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 OR2A5Q96R48 311 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 POLDIP3Q9BY77 421 aaKnown RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 MKRN2Q9H000 416 aaKnown RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 TESQ9UGI8 421 aaKnown RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 MRTO4Q9UKD2 239 aaKnown RBP5.56□□□□□ -1.52
PTPRD-206ENST00000397617 SLC13A4Q9UKG4 626 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 A0A1W2PQ72 361 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 PRSS38A1L453 326 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 K7EQS6 105 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CNR2P34972 360 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 GGT2P36268 569 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 TAS2R50P59544 299 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 RHAGQ02094 409 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CD47Q08722 323 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 FRMPD2BQ6IN97 320 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CYP2R1Q6VVX0 501 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 VRK3Q8IV63 474 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 C12orf66Q96MD2 445 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 MRI1Q9BV20 369 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 CPNE7Q9UBL6 633 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 POMT2Q9UKY4 750 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 DAPP1Q9UN19 280 aa5.56□□□□□ -1.52
PTPRD-206ENST00000397617 TLCD2A6NGC4 264 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 TIPRLO75663 272 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ARSAP15289 507 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SLC19A1P41440 591 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 CCT3P49368 545 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 MANFP55145 182 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 HPCAP84074 193 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 C2orf80Q0P641 193 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 PRTGQ2VWP7 1150 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF829Q3KNS6 432 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 LEXMQ3ZCV2 418 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 LRRC23Q53EV4 343 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SPPL2CQ8IUH8 684 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SLC44A3Q8N4M1 653 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ACOT4Q8N9L9 421 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 LRTOMTQ8WZ04 291 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SLC47A1Q96FL8 570 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 TMEFF2Q9UIK5 374 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 RPL36Q9Y3U8 105 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 A0A0J9YY10 115 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 NUDT21O43809 227 aaKnown RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 CD1AP06126 327 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF883P0CG24 379 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ST3GAL3Q11203 375 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 TRAM2Q15035 370 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ENTPD8Q5MY95 495 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SLX4IPQ5VYV7 408 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF438Q7Z4V0 828 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 TMCO2Q7Z6W1 182 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ANKRD13BQ86YJ7 626 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 OR4K14Q8NGD5 310 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 SLC35A5Q9BS91 424 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 FAM118AQ9NWS6 357 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 PAK1IP1Q9NWT1 392 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 C2orf92A0A1B0GVN3 265 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 CLDN4O14493 209 aa5.55□□□□□ -1.52
PTPRD-206ENST00000397617 FOXD2O60548 495 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-206ENST00000397617 ASGR2P07307 311 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms