RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RXRGP48443 463 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 LBX1P52954 281 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 FADDQ13158 208 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 TAB1Q15750 504 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 CRB2Q5IJ48 1285 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 PRSS48Q7RTY5 328 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZFP41Q8N8Y5 198 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 C7orf57Q8NEG2 295 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 TP53INP1Q96A56 240 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 TM4SF18Q96CE8 201 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ASB16Q96NS5 453 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 C1GALT1Q9NS00 363 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC9A8Q9Y2E8 581 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 A0A1W2PS29 197 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 C1orf226A1L170 272 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 MAGEA2P43356 314 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 CRISP1P54107 249 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ERVK-21P61565 698 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 LSM11P83369 360 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 RUNX1T1Q06455 604 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 CTF1Q16619 201 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 C18orf63Q68DL7 685 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 GTF2IRD2BQ6EKJ0 949 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SMARCD3Q6STE5 483 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC16A12Q6ZSM3 486 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 GTF2IRD2Q86UP8 949 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ANKRD13BQ86YJ7 626 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 KLHDC8AQ8IYD2 350 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 IPCEF1Q8WWN9 437 aaPredicted RBP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC38A4Q969I6 547 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 VOPP1Q96AW1 172 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 RBCK1Q9BYM8 510 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 UCK2Q9BZX2 261 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 WDR12Q9GZL7 423 aaKnown RBP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 POLR2J2Q9GZM3 115 aaKnown RBP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 MYNNQ9NPC7 610 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 C14orf119Q9NWQ9 140 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 MKLN1Q9UL63 735 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF232Q9UNY5 417 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 FNDC1Q4ZHG4 1894 aaPredicted RBP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC35F4A4IF30 521 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 CLCA1A8K7I4 914 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 TFECO14948 347 aaPredicted RBP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ENTPD6O75354 484 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 RPLP0P05388 317 aaKnown RBP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 BMP4P12644 408 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 CHMP24386 653 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SOX6P35712 828 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 RPS7P62081 194 aaKnown RBP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 CD300CQ08708 224 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 FCHO2Q0JRZ9 810 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 GRSF1Q12849 480 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 DEFB134Q4QY38 66 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SPANXN2Q5MJ10 180 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF730Q6ZMV8 503 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR5P2Q8WZ92 322 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 CAMK1GQ96NX5 476 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 EPYCQ99645 322 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SGPP1Q9BX95 441 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR52A5Q9H2C5 316 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 GPN2Q9H9Y4 310 aaPredicted RBP9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ABCB9Q9NP78 766 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 ATP6V1HQ9UI12 483 aa9.91□□□□□ -0.82
CPSF1P1-201ENST00000397477 SPTBP11277 2137 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 CACNA1IQ9P0X4 2223 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 EFCAB10A6NFE3 127 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 GCM2O75603 506 aaPredicted RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 ASGR2P07307 311 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 JUNBP17275 347 aaPredicted RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 CD72P21854 359 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 PRPH2P23942 346 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 CRYBA2P53672 197 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 ATAD3BQ5T9A4 648 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR4C11Q6IEV9 310 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 ADAMTS15Q8TE58 950 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 TRUB1Q8WWH5 349 aaKnown RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 C1GALT1C1Q96EU7 318 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 MGLLQ99685 303 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 CENPOQ9BU64 300 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 DPEP2Q9H4A9 486 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF780BQ9Y6R6 833 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 URB1O60287 2271 aaKnown RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 SEC16AO15027 2179 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 FUOMA2VDF0 154 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 FOXE1O00358 373 aaPredicted RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 BTN3A3O00478 584 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 GNB5O14775 395 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 TNFRSF21O75509 655 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 HMGN2P05204 90 aaKnown RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 CCNYL3P0C7X3 344 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF12P17014 697 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 SIM1P81133 766 aaPredicted RBP9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 GPR68Q15743 365 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF404Q494X3 552 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 C9orf50Q5SZB4 431 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 LIPKQ5VXJ0 399 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 ADGRF3Q8IZF5 1079 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 GHDCQ8N2G8 530 aa9.9□□□□□ -0.82
CPSF1P1-201ENST00000397477 TMIEQ8NEW7 156 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms