RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CMAHPQ9Y471 501 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 PIPSLA2A3N6 862 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 ARRDC5A6NEK1 342 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 LALBAP00709 142 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 APEX1P27695 318 aaKnown RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 ASAH1Q13510 395 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 PIN1Q13526 163 aaPredicted RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 EFR3AQ14156 821 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 P2RY14Q15391 338 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 GPAT3Q53EU6 434 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 SLC35F1Q5T1Q4 408 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 TMEM25Q86YD3 366 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 OXR1Q8N573 874 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 C2orf73Q8N5S3 287 aaPredicted RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 C17orf50Q8WW18 174 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 PPCDCQ96CD2 204 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 SENP5Q96HI0 755 aaPredicted RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 METTL2AQ96IZ6 378 aaKnown RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 TMEM175Q9BSA9 504 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 ITM2BQ9Y287 266 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 A0A1W2PRB8 838 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 SMLR1H3BR10 107 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 C1orf105O95561 183 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 SELPP16109 830 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 PTX3P26022 381 aaPredicted RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 PTGER1P34995 402 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 SOAT1P35610 550 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 CHI3L1P36222 383 aaPredicted RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 KRR1Q13601 381 aaKnown RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 MED27Q6P2C8 311 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 CADM2Q8N3J6 435 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 OR9Q1Q8NGQ5 310 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 KLHL6Q8WZ60 621 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 KATNB1Q9BVA0 655 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 PLA2G12AQ9BZM1 189 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 UCK2Q9BZX2 261 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 IFNW1P05000 195 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 MRPS15P82914 257 aaKnown RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 TSTA3Q13630 321 aaPredicted RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 ELOAQ14241 798 aaKnown RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 ZNF630Q2M218 657 aaPredicted RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 TIMM50Q3ZCQ8 353 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 SYT14P1Q58G82 188 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 MFSD4BQ5TF39 518 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 HTR3DQ70Z44 454 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 NOXA1Q86UR1 476 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 BTN2A2Q8WVV5 523 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 DHRS1Q96LJ7 313 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 DEPDC7Q96QD5 511 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 CPEB1Q9BZB8 566 aaKnown RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 MAN2C1Q9NTJ4 1040 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 K7ESM1 405 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 AKR7A2O43488 359 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 ALPPP05187 535 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 SOX18P35713 384 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 DAB2P98082 770 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 CHRNEQ04844 493 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 NCF4Q15080 339 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 SHFQ7M4L6 423 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 ZFP41Q8N8Y5 198 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 TMEM19Q96HH6 336 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 PRR14Q9BWN1 585 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 ACOXLQ9NUZ1 547 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
NUP98-204ENST00000397004 KIF26AQ9ULI4 1882 aaPredicted RBP13.22□□□□□ -0.29
NUP98-204ENST00000397004 TRAV19A0A0A6YYK7 116 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 TLX2O43763 284 aaPredicted RBP13.21□□□□□ -0.29
NUP98-204ENST00000397004 PSMA1P25786 263 aaKnown RBP13.21□□□□□ -0.29
NUP98-204ENST00000397004 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 FAM131AQ6UXB0 335 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 ZER1Q7Z7L7 766 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 ZBED6CLQ96FA7 236 aaPredicted RBP13.21□□□□□ -0.29
NUP98-204ENST00000397004 SIRT3Q9NTG7 399 aaPredicted RBP13.21□□□□□ -0.29
NUP98-204ENST00000397004 SEC14L4Q9UDX3 406 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 A4GNTQ9UNA3 340 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 INSL5Q9Y5Q6 135 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 ALX3O95076 343 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 TNNI3P19429 210 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 DSTNP60981 165 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 ATAT1Q5SQI0 421 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 LHX8Q68G74 356 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 KIAA1841Q6NSI8 718 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 PDZD3Q86UT5 571 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 ATP6V1C2Q8NEY4 427 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 PROKR2Q8NFJ6 384 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 IL17FQ96PD4 163 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 TVP23BQ9NYZ1 205 aa13.21□□□□□ -0.29
NUP98-204ENST00000397004 AP2A2O94973 939 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 SOD1P00441 154 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 CHRNB1P11230 501 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 PCSK2P16519 638 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 ZNF628Q5EBL2 1059 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 PPP2R2DQ66LE6 453 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 LAMTOR1Q6IAA8 161 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 TRIM40Q6P9F5 258 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 KIF18BQ86Y91 864 aa13.21□□□□□ -0.3
NUP98-204ENST00000397004 AMER3Q8N944 861 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms