RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 TBC1D19Q8N5T2 526 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 TTLQ8NG68 377 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 OR4E2Q8NGC2 313 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 OR2A1Q8NGT9 310 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 HUS1BQ8NHY5 278 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 ADAMTS17Q8TE56 1095 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 CHTF18Q8WVB6 975 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 CANT1Q8WVQ1 401 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 PSMG3-AS1Q96PY0 264 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 BTBD9Q96Q07 612 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 MTERF1Q99551 399 aaKnown RBP16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 PAIP1Q9H074 479 aaKnown RBP16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 CHST8Q9H2A9 424 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 SRMSQ9H3Y6 488 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 SERHLQ9NQF3 203 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 SIRT5Q9NXA8 310 aa16.5■□□□□ 0.23
TNFSF13-205ENST00000396545 A0A096LPI6 279 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 SLC9B1P1A6NJY1 282 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 ETHE1O95571 254 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 GPIP06744 558 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 MSL3P1P0C860 447 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 CMPK1P30085 196 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 S100A3P33764 101 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 PGDP52209 483 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 AQP4P55087 323 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 CHAF1BQ13112 559 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 GRAMD1BQ3KR37 738 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 RUNDC3AQ59EK9 446 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 PRAMEF17Q5VTA0 474 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 ADGRG5Q8IZF4 528 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 EGLN2Q96KS0 407 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 ING2Q9H160 280 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 RHBGQ9H310 441 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 C1GALT1Q9NS00 363 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 TMEM184CQ9NVA4 438 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 SLC25A37Q9NYZ2 338 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 CNOT11Q9UKZ1 510 aaKnown RBP16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 MAPRE3Q9UPY8 281 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 SEC16AO15027 2179 aa16.49■□□□□ 0.23
TNFSF13-205ENST00000396545 DHRS12A0PJE2 317 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 ARGFXA6NJG6 315 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 MEN1O00255 615 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 MYO1DO94832 1006 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 KLK3P07288 261 aaPredicted RBP16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 CHRM5P08912 532 aaPredicted RBP16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 RAB40ALP0C0E4 278 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 RORAP35398 523 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 GRK3P35626 688 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 OR4D2P58180 307 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 MTPNP58546 118 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 RAE1P78406 368 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 REEP5Q00765 189 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 ACSM2AQ08AH3 577 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 DDX39BQ13838 428 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 SPIN4Q56A73 249 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 ACSM2BQ68CK6 577 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 ADNP2Q6IQ32 1131 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 LCN10Q6JVE6 187 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 IFNEQ86WN2 208 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 LMNTD1Q8N9Z9 388 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 LRTOMTQ8WZ04 291 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 CCDC115Q96NT0 180 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 SH3GL1Q99961 368 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 RMND5AQ9H871 391 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 FANCEQ9HB96 536 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 MRPS30Q9NP92 439 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 MAGEL2Q9UJ55 1249 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 NOTCH2Q04721 2471 aa16.48■□□□□ 0.23
TNFSF13-205ENST00000396545 UMPSP11172 480 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 PCNAP12004 261 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 CDH3P22223 829 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 PTX3P26022 381 aaPredicted RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 PTPN6P29350 595 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 UQCRFS1P47985 274 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 SRSF11Q05519 484 aaKnown RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 HMBOX1Q6NT76 420 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 GALNT18Q6P9A2 607 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 C2orf73Q8N5S3 287 aaPredicted RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 PAPD5Q8NDF8 572 aaKnown RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 OR1L3Q8NH93 324 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 ITCHQ96J02 903 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 ZNF583Q96ND8 569 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 CPPED1Q9BRF8 314 aaPredicted RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 SARGQ9BW04 601 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 ACAT2Q9BWD1 397 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 EBPLQ9BY08 206 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 NLNQ9BYT8 704 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 XKR8Q9H6D3 395 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 DMRT3Q9NQL9 472 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 BATF3Q9NR55 127 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 SNX7Q9UNH6 387 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 USP22Q9UPT9 525 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 ICE1Q9Y2F5 2266 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 TRBC2A0A5B9 178 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 GSAPA4D1B5 854 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 ANKDD1BA6NHY2 528 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 TTLL8A6PVC2 850 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 HNRNPRO43390 633 aaKnown RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 CEACAM4O75871 244 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 UQCRBP14927 111 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms