RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 H3BN98 237 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 PSMA1P25786 263 aaKnown RBP14.91□□□□□ -0.02
HOXA3-202ENST00000396352 ACADLP28330 430 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 METAP1P53582 386 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 DEFB103AP81534 67 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 CNKSR3Q6P9H4 555 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 TSSK6Q9BXA6 273 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 SRRQ9GZT4 340 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 ZBP1Q9H171 429 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 SIRT3Q9NTG7 399 aaPredicted RBP14.91□□□□□ -0.02
HOXA3-202ENST00000396352 GRIP1Q9Y3R0 1128 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 RPL36Q9Y3U8 105 aaKnown RBP14.91□□□□□ -0.02
HOXA3-202ENST00000396352 HMGN4O00479 90 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 SEMA3DO95025 777 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 CYP17A1P05093 508 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 H1F0P07305 194 aaKnown RBP14.91□□□□□ -0.02
HOXA3-202ENST00000396352 TMPRSS11AQ6ZMR5 421 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 DEF8Q6ZN54 512 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 COMTD1Q86VU5 262 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 PHC2Q8IXK0 858 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 TCEANCQ8N8B7 351 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 GALNT6Q8NCL4 622 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 OR8J1Q8NGP2 316 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 SLC7A13Q8TCU3 470 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 ZNF354BQ96LW1 612 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 TPK1Q9H3S4 243 aa14.91□□□□□ -0.02
HOXA3-202ENST00000396352 ANKDD1BA6NHY2 528 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 RTCAO00442 366 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 KRT8P05787 483 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 KCNJ5P48544 419 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 MLLT11Q13015 90 aaPredicted RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 OCLNQ16625 522 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 PRAMEF14Q5SWL7 426 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 PRAMEF13Q5VWM6 474 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 CASP12Q6UXS9 341 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 TRMT11Q7Z4G4 463 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 IL17RCQ8NAC3 791 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 PROKR2Q8NFJ6 384 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 OR5P2Q8WZ92 322 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 UBE2E3Q969T4 207 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 ZDHHC5Q9C0B5 715 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 POLR2J2Q9GZM3 115 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 POLR2J3Q9H1A7 115 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 PLAGL1Q9UM63 463 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 IQCMA0A1B0GVH7 501 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 WDR5P61964 334 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 FLYWCH1Q4VC44 716 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 ZNF517Q6ZMY9 492 aaPredicted RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 UTS2BQ765I0 119 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 C2orf73Q8N5S3 287 aaPredicted RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 IQCF1Q8N6M8 205 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 FAM181AQ8N9Y4 354 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 TM4SF18Q96CE8 201 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 SERHL2Q9H4I8 314 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 MVB12BQ9H7P6 319 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 C5AR2Q9P296 337 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 ANHXE9PGG2 379 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 PDPK1O15530 556 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 IL7P13232 177 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 AZGP1P25311 298 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 MANFP55145 182 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 NFE2L1Q14494 772 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 LARS2Q15031 903 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 LIPKQ5VXJ0 399 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 TRIM69Q86WT6 500 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 HCAR2Q8TDS4 363 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 SETD7Q8WTS6 366 aaKnown RBP14.9□□□□□ -0.02
HOXA3-202ENST00000396352 OR2B2Q9GZK3 357 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 MARCH7Q9H992 704 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 SEMA3GQ9NS98 782 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 SAGE1Q9NXZ1 904 aa14.9□□□□□ -0.02
HOXA3-202ENST00000396352 MKI67P46013 3256 aaKnown RBP14.89□□□□□ -0.03
HOXA3-202ENST00000396352 PRKYO43930 277 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 MOSPD3O75425 235 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 DDX5P17844 614 aaKnown RBP14.89□□□□□ -0.03
HOXA3-202ENST00000396352 BSGP35613 385 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 FRKP42685 505 aaPredicted RBP14.89□□□□□ -0.03
HOXA3-202ENST00000396352 PCBP4P57723 403 aaKnown RBP14.89□□□□□ -0.03
HOXA3-202ENST00000396352 HSPB3Q12988 150 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 TARDBPQ13148 414 aaKnown RBP eCLIP14.89□□□□□ -0.03
HOXA3-202ENST00000396352 HEPACAMQ14CZ8 416 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 TEAD2Q15562 447 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 CCDC149Q6ZUS6 474 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 C6orf120Q7Z4R8 191 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 SLAIN1Q8ND83 568 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 SLC25A46Q96AG3 418 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 LRIG1Q96JA1 1093 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 ST6GAL2Q96JF0 529 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 NRTNQ99748 197 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 A4GNTQ9UNA3 340 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 CMAHPQ9Y471 501 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 COL4A3Q01955 1670 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 PRAMEF27A3QJZ7 478 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 TBX19O60806 448 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 MMP20O60882 483 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 MAPK12P53778 367 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 GLYR1Q49A26 553 aaPredicted RBP14.89□□□□□ -0.03
HOXA3-202ENST00000396352 C6orf183Q5T699 404 aa14.89□□□□□ -0.03
HOXA3-202ENST00000396352 KHDRBS2Q5VWX1 349 aaKnown RBP14.89□□□□□ -0.03
HOXA3-202ENST00000396352 LCTLQ6UWM7 567 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms