RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 A0A0G2JN53 185 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 TMEM247A6NEH6 219 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 TBC1D3FA6NER0 549 aaPredicted RBP15.89■□□□□ 0.13
NUP50-202ENST00000396096 CLCA1A8K7I4 914 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 TBC1D3LB9A6J9 549 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 C4orf51C9J302 202 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 MAN1A2O60476 641 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 ADAM23O75077 832 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 OXSR1O95747 527 aaPredicted RBP15.89■□□□□ 0.13
NUP50-202ENST00000396096 CDK1P06493 297 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 TBC1D3HP0C7X1 549 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 HIST1H1TP22492 207 aaPredicted RBP15.89■□□□□ 0.13
NUP50-202ENST00000396096 PSMB9P28065 219 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 CMPK1P30085 196 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 NTSP30990 170 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 MLLT10P55197 1068 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 TP53BP2Q13625 1128 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 GANABQ14697 944 aaKnown RBP15.89■□□□□ 0.13
NUP50-202ENST00000396096 TBC1D3GQ6DHY5 549 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 TBC1D3CQ6IPX1 549 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 FAM92BQ6ZTR7 304 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 TBC1D3Q8IZP1 549 aaPredicted RBP15.89■□□□□ 0.13
NUP50-202ENST00000396096 FBXL6Q8N531 539 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 IL17RCQ8NAC3 791 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 AQP11Q8NBQ7 271 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 SLC6A17Q9H1V8 727 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 NMNAT1Q9HAN9 279 aaPredicted RBP15.89■□□□□ 0.13
NUP50-202ENST00000396096 SCHIP1Q9P0W5 487 aaPredicted RBP15.89■□□□□ 0.13
NUP50-202ENST00000396096 MOSPD1Q9UJG1 213 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 ACAD8Q9UKU7 415 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 COLEC10Q9Y6Z7 277 aa15.89■□□□□ 0.13
NUP50-202ENST00000396096 SNRNP200O75643 2136 aaKnown RBP15.89■□□□□ 0.13
NUP50-202ENST00000396096 PRSS38A1L453 326 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 PRAMEF27A3QJZ7 478 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 CLDN24A6NM45 220 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 ZAR1LA6NP61 321 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 ANHXE9PGG2 379 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 SH3BP5O60239 455 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 ADAP00813 363 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 COL9A1P20849 921 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 CD72P21854 359 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 FUT4P22083 530 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 ATP5A1P25705 553 aaKnown RBP15.88■□□□□ 0.13
NUP50-202ENST00000396096 TGFBR2P37173 567 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 SLAMF1Q13291 335 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 TCTN3Q6NUS6 607 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 KLHL17Q6TDP4 642 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 WASH2PQ6VEQ5 465 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 MTSS1LQ765P7 747 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 ACOT4Q8N9L9 421 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 SRFBP1Q8NEF9 429 aaKnown RBP15.88■□□□□ 0.13
NUP50-202ENST00000396096 B4GALNT2Q8NHY0 566 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 GGHQ92820 318 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 OR51I1Q9H343 314 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 FZD3Q9NPG1 666 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 SPHK1Q9NYA1 384 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 SNX7Q9UNH6 387 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 PCDHGA4Q9Y5G9 962 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 RFXAPO00287 272 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 ERI3O43414 337 aaKnown RBP15.88■□□□□ 0.13
NUP50-202ENST00000396096 SLC28A2O43868 658 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 MPZL2O60487 215 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 SERPINB7O75635 380 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 GASTP01350 101 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 HOXB2P14652 356 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 NR4A1P22736 598 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 NDUFS1P28331 727 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 MAT2AP31153 395 aaKnown RBP15.88■□□□□ 0.13
NUP50-202ENST00000396096 SLC19A1P41440 591 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 KHKP50053 298 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 C21orf59P57076 290 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 PPP2CBP62714 309 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 PPP2CAP67775 309 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 LRRC32Q14392 662 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 TOR1AIP1Q5JTV8 583 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 Q6ZNX1 250 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 USP30Q70CQ3 517 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 FAM20CQ8IXL6 584 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 TAGAPQ8N103 731 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 MOAP1Q96BY2 351 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 HSPBAP1Q96EW2 488 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 VMP1Q96GC9 406 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 TREX2Q9BQ50 279 aaPredicted RBP15.88■□□□□ 0.13
NUP50-202ENST00000396096 BCL2L10Q9HD36 194 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 SEMA3GQ9NS98 782 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 OR6C2Q9NZP2 312 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 CLEC1BQ9P126 229 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 MSRAQ9UJ68 235 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 ATG2BQ96BY7 2078 aa15.88■□□□□ 0.13
NUP50-202ENST00000396096 TRBV4-1A0A0J9YWV2 114 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 A0A1W2PR48 441 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 FAAHO00519 579 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 SLC31A1O15431 190 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 SEMA7AO75326 666 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 LCKP06239 509 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 OR12D1P0DN82 309 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 HOXB3P14651 431 aaPredicted RBP15.87■□□□□ 0.13
NUP50-202ENST00000396096 GPC1P35052 558 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 GSSP48637 474 aa15.87■□□□□ 0.13
NUP50-202ENST00000396096 IDH2P48735 452 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms