RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 GPN3Q9UHW5 284 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TLCD2A6NGC4 264 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 H0YIG0 161 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF821O75541 412 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 NPPBP16860 134 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 LCN1P31025 176 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 MLLT3P42568 568 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 GPR143P51810 404 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ADPRHP54922 357 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PRPS1P60891 318 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PTPRCAPQ14761 206 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SHHQ15465 462 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 LRRC73Q5JTD7 316 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 BICRALQ6AI39 1079 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLCO4C1Q6ZQN7 724 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 DUS3LQ96G46 650 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 IL4I1Q96RQ9 567 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 WDR83Q9BRX9 315 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 NDRG2Q9UN36 371 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLC17A4Q9Y2C5 497 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLC35A3Q9Y2D2 325 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 FAM20BO75063 409 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TSPAN12O95859 305 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 GPR3P46089 330 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TARDBPQ13148 414 aaKnown RBP eCLIP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLC5A12Q1EHB4 618 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CYBRD1Q53TN4 286 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF789Q5FWF6 425 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PIWIL3Q7Z3Z3 882 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 C6orf120Q7Z4R8 191 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 FTMTQ8N4E7 242 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 OR2T33Q8NG76 320 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 MOSPD2Q8NHP6 518 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SORCS1Q8WY21 1168 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 LYRM4Q9HD34 91 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 STMN3Q9NZ72 180 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ENPP4Q9Y6X5 453 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TCRBV3S1A0A5B6 114 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PLRG1O43660 514 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ARL6IP5O75915 188 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ALAS2P22557 587 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 IL12BP29460 328 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 STAT5AP42229 794 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SNAPC1Q16533 368 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF423Q2M1K9 1284 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TRIM16LQ309B1 348 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ZBED5Q49AG3 693 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RABL3Q5HYI8 236 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ARMC4Q5T2S8 1044 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 OR4F3Q6IEY1 312 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 FAM20CQ8IXL6 584 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RNF113BQ8IZP6 322 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 VWA5B2Q8N398 1253 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 C10orf53Q8N6V4 93 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CSNK1A1LQ8N752 337 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 B4GALNT2Q8NHY0 566 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RSC1A1Q92681 617 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 NEURL3Q96EH8 262 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 KCNK12Q9HB15 430 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 DUSP22Q9NRW4 184 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 OLAHQ9NV23 265 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 MKLN1Q9UL63 735 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 U3KQV3 271 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 VILLO15195 856 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 KCNK5O95279 499 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 IFI6P09912 130 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 HSMCR30P0CW71 290 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CD27P26842 260 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PSMB9P28065 219 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CASRP41180 1078 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLC6A8P48029 635 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 AGTR2P50052 363 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 EPHA4P54764 986 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TMBIM6P55061 237 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 MRPL28Q13084 256 aaKnown RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CLCA4Q14CN2 919 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 DEFB134Q4QY38 66 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 CPZQ66K79 652 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 KIAA1211LQ6NV74 962 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TLDC1Q6P9B6 456 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 C11orf88Q6PI97 169 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SUSD1Q6UWL2 747 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 PRR23CQ6ZRP0 262 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 RPLP0P6Q8NHW5 317 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 BIRC7Q96CA5 298 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ALG14Q96F25 216 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM74Q96NL1 305 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SLC39A3Q9BRY0 314 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 COQ10BQ9H8M1 238 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 SPATA6Q9NWH7 488 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 KCNK6Q9Y257 313 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 A0A0J9YY10 115 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TCRBV21S2A2A0A5A6 115 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TOX3O15405 576 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-203ENST00000395896 GGT1P19440 569 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 HTR3AP46098 478 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ACTA2P62736 377 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 ACTG2P63267 376 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 TCEAL5Q5H9L2 206 aa3.23□□□□□ -1.89
VPS13C-203ENST00000395896 HSD11B1LQ7Z5J1 315 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms