RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CEP128Q6ZU80 1094 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 TMEM251Q8N6I4 163 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 PTGR2Q8N8N7 351 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-204ENST00000395793 GOLM1Q8NBJ4 401 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 NOA1Q8NC60 698 aaKnown RBP16.66■□□□□ 0.26
CXCL12-204ENST00000395793 OR52B6Q8NGF0 335 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 OR5L2Q8NGL0 311 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 NUBPLQ8TB37 319 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 ISL2Q96A47 359 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 FBXL20Q96IG2 436 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 LURAP1Q96LR2 239 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 C16orf45Q96MC5 204 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-204ENST00000395793 DDX31Q9H8H2 851 aaKnown RBP16.66■□□□□ 0.26
CXCL12-204ENST00000395793 ZBTB26Q9HCK0 441 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 SH2D2AQ9NP31 389 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 MS4A12Q9NXJ0 267 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 TUBA8Q9NY65 449 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-204ENST00000395793 ADGRG4Q8IZF6 3080 aa16.66■□□□□ 0.26
CXCL12-204ENST00000395793 AIFM1O95831 613 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 GBAP04062 536 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 COX7A2P14406 83 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 ALOX15P16050 662 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-204ENST00000395793 PTX3P26022 381 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-204ENST00000395793 ECHS1P30084 290 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 MAGEA5P43359 124 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 ARFIP1P53367 373 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 HERVK_113P63132 956 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 ERVK-8P63133 956 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 MPEG1Q2M385 716 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 ZNF791Q3KP31 576 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-204ENST00000395793 OPN5Q6U736 354 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 GK5Q6ZS86 529 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 RELL1Q8IUW5 271 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 SLC44A1Q8WWI5 657 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 TANKQ92844 425 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 NSUN5Q96P11 429 aaKnown RBP16.65■□□□□ 0.26
CXCL12-204ENST00000395793 FAM173AQ9BQD7 235 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 ERVK-6Q9BXR3 956 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 ENKD1Q9H0I2 346 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 PNPLA3Q9NST1 481 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 SACM1LQ9NTJ5 587 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
CXCL12-204ENST00000395793 ERVK-19Q9WJR5 959 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 NINQ8N4C6 2090 aa16.65■□□□□ 0.26
CXCL12-204ENST00000395793 FREM3P0C091 2139 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 INTS1Q8N201 2190 aaKnown RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 TEP1Q99973 2627 aaKnown RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 NPIPA2E9PIF3 369 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 NPIPA3F8WFD2 350 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 ACOT7O00154 380 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 URI1O94763 535 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 ACSL3O95573 720 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 IGHG3P01860 377 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 FAM58BPP0C7Q3 252 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 NR2F6P10588 404 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 PHBP35232 272 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 PIGAP37287 484 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 KRTAP10-9P60411 292 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 TRAF3Q13114 568 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 CUL3Q13618 768 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 SPRED3Q2MJR0 410 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 NDUFAF5Q5TEU4 345 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 KLC3Q6P597 504 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 FAM47EQ6ZV65 393 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 RPS27LQ71UM5 84 aaKnown RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 SLC22A16Q86VW1 577 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 ST13P4Q8IZP2 240 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 EID3Q8N140 333 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 CA5BP1Q8WTZ4 195 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 SGCZQ96LD1 299 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 TREX2Q9BQ50 279 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 CENPKQ9BS16 269 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 CNPPD1Q9BV87 410 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 TP63Q9H3D4 680 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 NOL11Q9H8H0 719 aaKnown RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 IL1RL2Q9HB29 575 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 PROK2Q9HC23 129 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 TEX10Q9NXF1 929 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 XPR1Q9UBH6 696 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 TNFRSF10DQ9UBN6 386 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 PCTPQ9UKL6 214 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 RNF6Q9Y252 685 aa16.64■□□□□ 0.25
CXCL12-204ENST00000395793 TNPO3Q9Y5L0 923 aaKnown RBP16.64■□□□□ 0.25
CXCL12-204ENST00000395793 A0A1B0GTL3 188 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 FOXE1O00358 373 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-204ENST00000395793 CLDN9O95484 217 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 GPR75O95800 540 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 BUD31P41223 144 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-204ENST00000395793 SLC37A1P57057 533 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 NUP107P57740 925 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 PHEXP78562 749 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 ZNF267Q14586 743 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-204ENST00000395793 EBPQ15125 230 aaKnown RBP16.63■□□□□ 0.25
CXCL12-204ENST00000395793 WHAMMP3Q1A5X7 153 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 HYAL4Q2M3T9 481 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 RGS9BPQ6ZS82 235 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 TRILQ7L0X0 811 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 NUDT13Q86X67 352 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 FAM109AQ8N4B1 249 aa16.63■□□□□ 0.25
CXCL12-204ENST00000395793 MMGT1Q8N4V1 131 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms