RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 IL3P08700 152 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 ANXA4P09525 319 aaPredicted RBP15.45■□□□□ 0.06
CXCL1-201ENST00000395761 TNNI3P19429 210 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 PRPH2P23942 346 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 RPL14P50914 215 aaKnown RBP15.45■□□□□ 0.06
CXCL1-201ENST00000395761 HK2P52789 917 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 TAS2R50P59544 299 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 TRA2BP62995 288 aaKnown RBP15.45■□□□□ 0.06
CXCL1-201ENST00000395761 KIAA0040Q15053 153 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 ELAVL1Q15717 326 aaKnown RBP15.45■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF750Q32MQ0 723 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 CRB2Q5IJ48 1285 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 OR52E8Q6IFG1 317 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 ISLR2Q6UXK2 745 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 RBMXL3Q8N7X1 1067 aaKnown RBP15.45■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF781Q8N8C0 355 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 APCDD1LQ8NCL9 501 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 B3GNT7Q8NFL0 401 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 ELP5Q8TE02 316 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 C3orf30Q96M34 536 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 NPAS2Q99743 824 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 KCNK13Q9HB14 408 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 LRTM1Q9HBL6 345 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF223Q9UK11 482 aaPredicted RBP15.45■□□□□ 0.06
CXCL1-201ENST00000395761 DLGAP4Q9Y2H0 992 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 POLR3HQ9Y535 204 aaPredicted RBP15.45■□□□□ 0.06
CXCL1-201ENST00000395761 C17orf105B2RV13 164 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 NPIPB8E9PQR5 432 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 SLCO1B7G3V0H7 640 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 KLHL41O60662 606 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 SKAP2O75563 359 aaPredicted RBP15.44■□□□□ 0.06
CXCL1-201ENST00000395761 JUNP05412 331 aaKnown RBP15.44■□□□□ 0.06
CXCL1-201ENST00000395761 ALOX15P16050 662 aaPredicted RBP15.44■□□□□ 0.06
CXCL1-201ENST00000395761 LSP1P33241 339 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 STT3AP46977 705 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 ST13P50502 369 aaKnown RBP15.44■□□□□ 0.06
CXCL1-201ENST00000395761 AP2B1P63010 937 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 MFAP5Q13361 173 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 NR6A1Q15406 480 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 TERF2Q15554 542 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 NADK2Q4G0N4 442 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 NOXRED1Q6NXP6 359 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 H3F3CQ6NXT2 135 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 IGFL2Q6UWQ7 119 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 IGFL3Q6UXB1 125 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 CRLF3Q8IUI8 442 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 TMEM132CQ8N3T6 1108 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 ZNF321PQ8N8H1 164 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 NCLNQ969V3 563 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 RBM18Q96H35 190 aaKnown RBP15.44■□□□□ 0.06
CXCL1-201ENST00000395761 DGAT2Q96PD7 388 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 LMF1Q96S06 567 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 C1orf109Q9NX04 203 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 PLA2G3Q9NZ20 509 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 GIMAP2Q9UG22 337 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 PPIEQ9UNP9 301 aaKnown RBP15.44■□□□□ 0.06
CXCL1-201ENST00000395761 CLCA3PQ9Y6N3 262 aa15.44■□□□□ 0.06
CXCL1-201ENST00000395761 BSNQ9UPA5 3926 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 C1orf226A1L170 272 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 HRKO00198 91 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 LSM1O15116 133 aaKnown RBP15.43■□□□□ 0.06
CXCL1-201ENST00000395761 DPM1O60762 260 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 TGDSO95455 350 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 DDAH2O95865 285 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 TACR1P25103 407 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 PIK3R1P27986 724 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 ALDH9A1P49189 494 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 XKP51811 444 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 GNGT1P63211 74 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 GALNTL6Q49A17 601 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 RFTN2Q52LD8 501 aaPredicted RBP15.43■□□□□ 0.06
CXCL1-201ENST00000395761 XKR7Q5GH72 579 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 FAM180BQ6P0A1 224 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 SLC48A1Q6P1K1 146 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 TEX19Q8NA77 164 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 OR4K14Q8NGD5 310 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 OR14A16Q8NHC5 309 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 CDC26Q8NHZ8 85 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.43■□□□□ 0.06
CXCL1-201ENST00000395761 PIWIL2Q8TC59 973 aaKnown RBP15.43■□□□□ 0.06
CXCL1-201ENST00000395761 CHMP6Q96FZ7 201 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 CCT7Q99832 543 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 FAIM2Q9BWQ8 316 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 OR8D2Q9GZM6 311 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 PNPOQ9NVS9 261 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 STMN3Q9NZ72 180 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 CSAG2Q9Y5P2 127 aa15.43■□□□□ 0.06
CXCL1-201ENST00000395761 TRBV11-1A0A0K0K1C0 115 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 ATP6AP2A0A1C7CYW4 349 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 GMNCA6NCL1 334 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 SYNDIG1LA6NDD5 238 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 PRKNO60260 465 aaPredicted RBP15.42■□□□□ 0.06
CXCL1-201ENST00000395761 OR10H2O60403 315 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 SHOX2O60902 331 aaPredicted RBP15.42■□□□□ 0.06
CXCL1-201ENST00000395761 ATP6AP2O75787 350 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 F10P00742 488 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 VIMP08670 466 aaKnown RBP15.42■□□□□ 0.06
CXCL1-201ENST00000395761 SLC35E2P0CK97 266 aa15.42■□□□□ 0.06
CXCL1-201ENST00000395761 RPL38P63173 70 aaKnown RBP15.42■□□□□ 0.06
CXCL1-201ENST00000395761 PLIN5Q00G26 463 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms