RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 GPR75O95800 540 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ENO1P06733 434 aaKnown RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 IL3P08700 152 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ALOX15P16050 662 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 TLX1P31314 330 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ARRB2P32121 409 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ALDH9A1P49189 494 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ARFIP1P53367 373 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ERVK-8P63133 956 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 PLIN5Q00G26 463 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 SRSF1Q07955 248 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 CSTF3Q12996 717 aaKnown RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 SERTAD2Q14140 314 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 TERF2Q15554 542 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 EIF2S3LQ2VIR3 472 aaKnown RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF766Q5HY98 468 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 SPDYAQ5MJ70 313 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 CES4AQ5XG92 561 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR52E8Q6IFG1 317 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 PAGE2Q7Z2X7 111 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 EXOC3L1Q86VI1 746 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF227Q86WZ6 799 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 TMEM132CQ8N3T6 1108 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 MDS2Q8NDY4 140 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF721Q8TF20 911 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 CHTF18Q8WVB6 975 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 DAZLQ92904 295 aaKnown RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 TM4SF18Q96CE8 201 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 UTP23Q9BRU9 249 aaKnown RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 CNPPD1Q9BV87 410 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 TMEM109Q9BVC6 243 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 RNF32Q9H0A6 362 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 TSPAN10Q9H1Z9 355 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 BRF2Q9HAW0 419 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 MS4A12Q9NXJ0 267 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 AHSPQ9NZD4 102 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 LRFN1Q9P244 771 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ABI3Q9P2A4 366 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 HEY2Q9UBP5 337 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 VPS4AQ9UN37 437 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 PPIEQ9UNP9 301 aaKnown RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ERVK-19Q9WJR5 959 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 STK38LQ9Y2H1 464 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 POLR3HQ9Y535 204 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 PRRC2CQ9Y520 2896 aaKnown RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 SCN2AQ99250 2005 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 GNG14A0A1W2PPG7 69 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 BLACEA4D250 179 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 G3V3Y1 287 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNHIT1O43257 154 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRIM13O60858 407 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ITGA10O75578 1167 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 LYPLA1O75608 230 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ERAL1O75616 437 aaKnown RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZFAND5O76080 213 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR6B1O95007 311 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 CLPSP04118 112 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 BPGMP07738 259 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 CT62P0C5K7 136 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 HSD3B1P14060 373 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 COX7A2P14406 83 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 HSD3B2P26439 372 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 MST1P26927 711 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 SSTR4P31391 388 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 TIA1P31483 386 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 FEN1P39748 380 aaKnown RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 RFC3P40938 356 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 SOX3P41225 446 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ETV4P43268 484 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 XKP51811 444 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 HK2P52789 917 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 RNF4P78317 190 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ACSM2AQ08AH3 577 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 MPP2Q14168 576 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF267Q14586 743 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 LTB4RQ15722 352 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 IMPG1Q17R60 797 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 PRSS53Q2L4Q9 553 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 C10orf62Q5T681 223 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 KANK2Q63ZY3 851 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ACSM2BQ68CK6 577 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 SLC48A1Q6P1K1 146 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 FAM180AQ6UWF9 173 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 HSDL2Q6YN16 418 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 GALNTL5Q7Z4T8 443 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 MDGA2Q7Z553 956 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 C9orf40Q8IXQ3 194 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ST13P4Q8IZP2 240 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 CNPY4Q8N129 248 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 MORN4Q8NDC4 146 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 SIMC1Q8NDZ2 872 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR2T11Q8NH01 316 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 SUN3Q8TAQ9 357 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 RIT1Q92963 219 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 KLHL29Q96CT2 875 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 RBM18Q96H35 190 aaKnown RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 SENP5Q96HI0 755 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 GAL3ST4Q96RP7 486 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 TUBB1Q9H4B7 451 aa7.12□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF395Q9H8N7 513 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms