RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 MAGP20916 626 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 DCKP27707 260 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 STXBP1P61764 594 aaKnown RBP17.53■□□□□ 0.4
STRADB-202ENST00000392249 YPEL5P62699 121 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 DUSP2Q05923 314 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 PUM1Q14671 1186 aaKnown RBP eCLIP17.53■□□□□ 0.4
STRADB-202ENST00000392249 COL19A1Q14993 1142 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 Q6ZPB1 254 aaPredicted RBP17.53■□□□□ 0.4
STRADB-202ENST00000392249 TSPYL5Q86VY4 417 aaPredicted RBP17.53■□□□□ 0.4
STRADB-202ENST00000392249 FRMD1Q8N878 549 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 SRFBP1Q8NEF9 429 aaKnown RBP17.53■□□□□ 0.4
STRADB-202ENST00000392249 OR10G6Q8NH81 332 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 UBE2FQ969M7 185 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 ZNF566Q969W8 418 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 NODALQ96S42 347 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 CCDC90BQ9GZT6 254 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 LHPPQ9H008 270 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 OR51I1Q9H343 314 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 RASSF1Q9NS23 344 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 RHCGQ9UBD6 479 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 HEMK1Q9Y5R4 338 aaPredicted RBP17.53■□□□□ 0.4
STRADB-202ENST00000392249 ENPP4Q9Y6X5 453 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 KNL1Q8NG31 2342 aa17.53■□□□□ 0.4
STRADB-202ENST00000392249 H3BMQ9 156 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 ZNF701M0R085 212 aaPredicted RBP17.52■□□□□ 0.4
STRADB-202ENST00000392249 SLC28A2O43868 658 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 GUCY1B2O75343 617 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 MATN1P21941 496 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 PRKAG1P54619 331 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 GPR19Q15760 415 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 SYPL1Q16563 259 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 MICAQ29983 383 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 CCDC116Q8IYX3 515 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 SLC22A18ASQ8N1D0 253 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 OR9Q2Q8NGE9 314 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 SUN3Q8TAQ9 357 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 XAGE5Q8WWM1 108 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 PATE1Q8WXA2 126 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 SLC22A18Q96BI1 424 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 COG8Q96MW5 612 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 RSPO3Q9BXY4 272 aaPredicted RBP17.52■□□□□ 0.4
STRADB-202ENST00000392249 GABARAPL3Q9BY60 117 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 ACER3Q9NUN7 267 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 TRNAU1APQ9NX07 287 aaKnown RBP17.52■□□□□ 0.4
STRADB-202ENST00000392249 TRPC4Q9UBN4 977 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 PCDHGA2Q9Y5H1 932 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 SNX5Q9Y5X3 404 aa17.52■□□□□ 0.4
STRADB-202ENST00000392249 PRAMEF27A3QJZ7 478 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 PCDH17O14917 1159 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 MFN2O95140 757 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 POLR2CP19387 275 aaPredicted RBP17.52■□□□□ 0.39
STRADB-202ENST00000392249 CD247P20963 164 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 FEN1P39748 380 aaKnown RBP17.52■□□□□ 0.39
STRADB-202ENST00000392249 MAPK10P53779 464 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 RPS15AP62244 130 aaKnown RBP17.52■□□□□ 0.39
STRADB-202ENST00000392249 SNRPNP63162 240 aaKnown RBP17.52■□□□□ 0.39
STRADB-202ENST00000392249 BTN3A2P78410 334 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 DYNC1I2Q13409 638 aaKnown RBP17.52■□□□□ 0.39
STRADB-202ENST00000392249 GPR18Q14330 331 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 MAD2L1BPQ15013 274 aaPredicted RBP17.52■□□□□ 0.39
STRADB-202ENST00000392249 SMN1Q16637 294 aaKnown RBP17.52■□□□□ 0.39
STRADB-202ENST00000392249 ZNF605Q86T29 641 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 TRIM48Q8IWZ4 208 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 GPR32P1Q8NGA4 272 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 FLVCR1-AS1Q8TAF5 88 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 ZNF420Q8TAQ5 688 aaPredicted RBP17.52■□□□□ 0.39
STRADB-202ENST00000392249 PITX2Q99697 317 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 NIPSNAP1Q9BPW8 284 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 DCUN1D5Q9BTE7 237 aa17.52■□□□□ 0.39
STRADB-202ENST00000392249 GSAPA4D1B5 854 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 CCDC85CA6NKD9 419 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 SEC14L2O76054 403 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 GADD45GO95257 159 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 ATE1O95260 518 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 IGHV4-34P06331 123 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 ARFIP1P53367 373 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 KCNC4Q03721 635 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 ILF3Q12906 894 aaKnown RBP eCLIP17.51■□□□□ 0.39
STRADB-202ENST00000392249 COL9A2Q14055 689 aaPredicted RBP17.51■□□□□ 0.39
STRADB-202ENST00000392249 APOBEC4Q8WW27 367 aaKnown RBP17.51■□□□□ 0.39
STRADB-202ENST00000392249 OR2A14Q96R47 310 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 MAPKAP1Q9BPZ7 522 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 TREX2Q9BQ50 279 aaPredicted RBP17.51■□□□□ 0.39
STRADB-202ENST00000392249 RHNO1Q9BSD3 238 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 DGCR6LQ9BY27 220 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 KLHL25Q9H0H3 589 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 TCEAL2Q9H3H9 227 aaPredicted RBP17.51■□□□□ 0.39
STRADB-202ENST00000392249 USP36Q9P275 1121 aaKnown RBP17.51■□□□□ 0.39
STRADB-202ENST00000392249 P2RX2Q9UBL9 471 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 CYP8B1Q9UNU6 501 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 ENTPD4Q9Y227 616 aa17.51■□□□□ 0.39
STRADB-202ENST00000392249 TMEM247A6NEH6 219 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 TMX2-CTNND1H3BSU7 103 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 ZNF888P0CJ79 500 aaPredicted RBP17.5■□□□□ 0.39
STRADB-202ENST00000392249 ANXA8P13928 327 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 UGT2B7P16662 529 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 RHCEP18577 417 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 TSFMP43897 325 aaKnown RBP17.5■□□□□ 0.39
STRADB-202ENST00000392249 LIM2P55344 173 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 KIR2DS3Q14952 304 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms