RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 EIF3KQ9UBQ5 218 aaKnown RBP2.36□□□□□ -2.03
RNU6-550P-201ENST00000391057 MRTO4Q9UKD2 239 aaKnown RBP2.36□□□□□ -2.03
RNU6-550P-201ENST00000391057 RNF212BA8MTL3 300 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 CACNB4O00305 520 aaPredicted RBP2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 MCF2LO15068 1137 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 PSMD3O43242 534 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 KBTBD11O94819 623 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 STBD1O95210 358 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 VENTXO95231 258 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 CPNE6O95741 557 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 PDGFBP01127 241 aaPredicted RBP2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 FCGR3AP08637 254 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 HSD17B1P14061 328 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 VCLP18206 1134 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 CALML3P27482 149 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 PPP2R1BP30154 601 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 STIP1P31948 543 aaKnown RBP2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 CTNNB1P35222 781 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 BRCC3P46736 316 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 TRA2BP62995 288 aaKnown RBP2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 CRMP1Q14194 572 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 EMC2Q15006 297 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 Q1RN00 199 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 ATAD3CQ5T2N8 411 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 RFWD3Q6PCD5 774 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 ABRAXAS1Q6UWZ7 409 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 ANKRD23Q86SG2 305 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 CCDC71Q8IV32 467 aaPredicted RBP2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 WDR49Q8IV35 697 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 OR6T1Q8NGN1 323 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 FAM46BQ96A09 425 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 CFAP36Q96G28 342 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 EPSTI1Q96J88 318 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 NTMT1Q9BV86 223 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 AKIRIN1Q9H9L7 192 aaPredicted RBP2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 MAGEF1Q9HAY2 307 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 GDF3Q9NR23 364 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 PNPLA3Q9NST1 481 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 STX8Q9UNK0 236 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 FER1L5A0AVI2 2057 aa2.35□□□□□ -2.03
RNU6-550P-201ENST00000391057 AGRNO00468 2067 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 LRRD1A4D1F6 860 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 ZNF487B1APH4 448 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 LRRTM2O43300 516 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 THY1P04216 161 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 MBL2P11226 248 aaPredicted RBP2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 B4GALT1P15291 398 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 MTIF2P46199 727 aaKnown RBP2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 NAAAQ02083 359 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 P2RY14Q15391 338 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 TRADDQ15628 312 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 STX1AQ16623 288 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 SMU1Q2TAY7 513 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 ITIH5Q86UX2 942 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 CCDC170Q8IYT3 715 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 ZBED8Q8IZ13 594 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 PARP8Q8N3A8 854 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 CD177Q8N6Q3 437 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 CHDHQ8NE62 594 aaPredicted RBP2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 OR6M1Q8NGM8 313 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 FLVCR1-AS1Q8TAF5 88 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 FBXO25Q8TCJ0 367 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 UBTD2Q8WUN7 234 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 CXorf58Q96LI9 332 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 SPAG8Q99932 426 aaPredicted RBP2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 SLC5A7Q9GZV3 580 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 C2orf40Q9H1Z8 148 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 CXXC4Q9H2H0 198 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 ELL3Q9HB65 397 aaPredicted RBP2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 ABCC13Q9NSE7 274 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 TAS2R16Q9NYV7 291 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 TECRQ9NZ01 308 aaKnown RBP2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 DHRS4-AS1Q9P1J3 65 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 ARMCX1Q9P291 453 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 FBXW2Q9UKT8 454 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 VSIG4Q9Y279 399 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 SLC6A5Q9Y345 797 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 NAALAD2Q9Y3Q0 740 aa2.34□□□□□ -2.03
RNU6-550P-201ENST00000391057 TRAV9-2A0A087WT02 112 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 FAM170AA1A519 330 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 SH3PXD2BA1X283 911 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 SMIM30A4D0T7 59 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 MEI4A8MW99 385 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 ZNF253O75346 499 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 GMNNO75496 209 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 PIGRP01833 764 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 MMP10P09238 476 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 CCDC159P0C7I6 412 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 IST1P53990 364 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 GEMP55040 296 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 PPIAP62937 165 aaKnown RBP2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 KRT83P78385 493 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 ABRAXAS2Q15018 415 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 C17orf58Q2M2W7 97 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 ZNF674Q2M3X9 581 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 CNPY1Q3B7I2 92 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 ANKRD55Q3KP44 614 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 TIMM50Q3ZCQ8 353 aa2.33□□□□□ -2.04
RNU6-550P-201ENST00000391057 SLC22A6Q4U2R8 563 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms