RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 RIGQ13278 110 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 P2RY14Q15391 338 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 HIGD2BQ4VC39 106 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 DDI2Q5TDH0 399 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 AGAP7PQ5VUJ5 663 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 RTL6Q6ICC9 239 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 B3GLCTQ6Y288 498 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 ZNF713Q8N859 430 aaPredicted RBP3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 SAMD12Q8N8I0 201 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 C16orf58Q96GQ5 468 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 HSD17B14Q9BPX1 270 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 FUNDC2Q9BWH2 189 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 SLC26A1Q9H2B4 701 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 GANQ9H2C0 597 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 NT5DC2Q9H857 520 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 COMMD8Q9NX08 183 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 AKAP7Q9P0M2 348 aaPredicted RBP3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 PCNX3Q9H6A9 2034 aa3.52□□□□□ -1.85
SNORA40.2-201ENST00000390847 BCLAF3A2AJT9 711 aaKnown RBP3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 YJEFN3A6XGL0 299 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 FRAT2O75474 233 aaPredicted RBP3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 PRDM1O75626 825 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 TXNDC12O95881 172 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 PNPP00491 289 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 IGHG1P01857 330 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 MT-ND1P03886 318 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 CALML3P27482 149 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 MTIF2P46199 727 aaKnown RBP3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 HERV-K104P63124 156 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 GFPT1Q06210 699 aaPredicted RBP3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 PDE7AQ13946 482 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 EMC2Q15006 297 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 MPPE1Q53F39 396 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 ZNF410Q86VK4 478 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 OR1K1Q8NGR3 316 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 MRPL53Q96EL3 112 aaKnown RBP3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 RPGRIP1Q96KN7 1286 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 SPAG8Q99932 426 aaPredicted RBP3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 DPEP3Q9H4B8 488 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 SLC25A19Q9HC21 320 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 RPS10P5Q9NQ39 176 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 ACOXLQ9NUZ1 547 aa3.51□□□□□ -1.85
SNORA40.2-201ENST00000390847 COL5A2P05997 1499 aaPredicted RBP3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 IGHV3-16A0A0C4DH30 117 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 MEI4A8MW99 385 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 EEF2KO00418 725 aaKnown RBP3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 PHF1O43189 567 aaPredicted RBP3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 KERAO60938 352 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 HSF2BPO75031 334 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 SH3BGRLO75368 114 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 MMP10P09238 476 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 AREGP15514 252 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 ZNF18P17022 549 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 ALDH3B1P43353 468 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 NSFP46459 744 aaKnown RBP3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 LIMK2P53671 638 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 LEMD1Q68G75 181 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 ARMCX5Q6P1M9 558 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 REG3GQ6UW15 175 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 ITIH5Q86UX2 942 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 LRRC49Q8IUZ0 686 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 RELL2Q8NC24 303 aaPredicted RBP3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 ZNRF1Q8ND25 227 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 KIAA1524Q8TCG1 905 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 COG3Q96JB2 828 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 ACAT2Q9BWD1 397 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 ELL3Q9HB65 397 aaPredicted RBP3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 TAS2R16Q9NYV7 291 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 NARFQ9UHQ1 456 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 SPATA2Q9UM82 520 aa3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 DIMT1Q9UNQ2 313 aaKnown RBP3.5□□□□□ -1.85
SNORA40.2-201ENST00000390847 SRRM5B3KS81 715 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 DDX39AO00148 427 aaKnown RBP3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 HCKP08631 526 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 FOLR2P14207 255 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 HLA-DPA1P20036 260 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 PTGER3P43115 390 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 PPP1R8Q12972 351 aaKnown RBP3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 PPP2R5CQ13362 524 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 LASP1Q14847 261 aaKnown RBP3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 GPAT3Q53EU6 434 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 ZNF506Q5JVG8 444 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 REP15Q6BDI9 236 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 ETFRF1Q6IPR1 90 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 CDC42EP5Q6NZY7 148 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 CDC20BQ86Y33 519 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 CCDC71Q8IV32 467 aaPredicted RBP3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 CNTN4Q8IWV2 1026 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 RTL3Q8N8U3 475 aaKnown RBP3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 CSNK1G2-AS1Q8NCQ2 148 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 CHDHQ8NE62 594 aaPredicted RBP3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 FBXO25Q8TCJ0 367 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 ATP6V0A1Q93050 837 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 EEF2KMTQ96G04 330 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 ZNF560Q96MR9 790 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 DCTN5Q9BTE1 182 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 NDUFA13Q9P0J0 144 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 VPS54Q9P1Q0 977 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 ERVK-18Q9QC07 812 aa3.49□□□□□ -1.85
SNORA40.2-201ENST00000390847 MRPL11Q9Y3B7 192 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms