RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 OR4C6Q8NH72 309 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 OR4K3Q96R72 315 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 TRIB3Q96RU7 358 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 EPYCQ99645 322 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 GALNT9Q9HCQ5 603 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 MGAT4CQ9UBM8 478 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 B4GALT6Q9UBX8 382 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 YARS2Q9Y2Z4 477 aaKnown RBP13.62□□□□□ -0.23
RTF1-201ENST00000389629 ZNF780BQ9Y6R6 833 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 DRGXA6NNA5 263 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 SCAMP2O15127 329 aaKnown RBP13.62□□□□□ -0.23
RTF1-201ENST00000389629 CLEC2LP0C7M8 214 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 ALPPL2P10696 532 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 DDOSTP39656 456 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 PIK3CBP42338 1070 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 CDC20Q12834 499 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 ZNF234Q14588 700 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 PRPF38BQ5VTL8 546 aaKnown RBP13.62□□□□□ -0.23
RTF1-201ENST00000389629 MEDAGQ5VYS4 303 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 USP51Q70EK9 711 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 SLC39A13Q96H72 371 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 EXOSC1Q9Y3B2 195 aaKnown RBP13.62□□□□□ -0.23
RTF1-201ENST00000389629 COL24A1Q17RW2 1714 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 NUMA1Q14980 2115 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 GNB5O14775 395 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 CACNG3O60359 315 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 OR6A2O95222 327 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 PDGFAP04085 211 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 GSTM3P21266 225 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 TIA1P31483 386 aaKnown RBP eCLIP13.62□□□□□ -0.232e-9■■■□□ 15.3
RTF1-201ENST00000389629 MASP1P48740 699 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 ESCO2Q56NI9 601 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 SLC27A4Q6P1M0 643 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 GDPGP1Q6ZNW5 385 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 CBLL1Q75N03 491 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 DNAJB7Q7Z6W7 309 aaPredicted RBP13.62□□□□□ -0.23
RTF1-201ENST00000389629 SPAG16Q8N0X2 631 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 ZNF558Q96NG5 402 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 NTMT1Q9BV86 223 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 OR2AG1Q9H205 316 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 GLTPQ9NZD2 209 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 NPAP1Q9NZP6 1156 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 P2RX2Q9UBL9 471 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 B8ZZF3 427 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 STC2O76061 302 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 NCBP2P52298 156 aaKnown RBP eCLIP13.62□□□□□ -0.234e-7■■□□□ 12.4
RTF1-201ENST00000389629 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
RTF1-201ENST00000389629 Q6ZVL8 140 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 TEX26Q8N6G2 289 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 C2orf15Q8WU43 125 aaKnown RBP13.62□□□□□ -0.23
RTF1-201ENST00000389629 DNAJC5Q9H3Z4 198 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 TAS2R3Q9NYW6 316 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 ENPP4Q9Y6X5 453 aa13.62□□□□□ -0.23
RTF1-201ENST00000389629 SCN1AP35498 2009 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 TEX46H3BTG2 121 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 FABP7O15540 132 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 CSN2P05814 226 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 RPS19P39019 145 aaKnown RBP13.61□□□□□ -0.23
RTF1-201ENST00000389629 SLC11A1P49279 550 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 FRMPD2BQ6IN97 320 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 SLC30A8Q8IWU4 369 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 CHPFQ8IZ52 775 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 P2RY13Q9BPV8 354 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 HPF1Q9NWY4 346 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 ATPIF1Q9UII2 106 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 LRRN3E7EW58 273 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 NARSO43776 548 aaKnown RBP13.61□□□□□ -0.23
RTF1-201ENST00000389629 ACVR1BP36896 505 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 SLC16A12Q6ZSM3 486 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 CEACAM19Q7Z692 300 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 GALNT13Q8IUC8 556 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 SYNPOQ8N3V7 929 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 OR6K6Q8NGW6 343 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 MCCC1Q96RQ3 725 aaPredicted RBP13.61□□□□□ -0.23
RTF1-201ENST00000389629 RTP3Q9BQQ7 232 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 LRRN3Q9H3W5 708 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 ASAH2Q9NR71 780 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 ASPDHA6ND91 283 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 PROM1O43490 865 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 RP2O75695 350 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 B3GALT4O96024 378 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 AMD1P17707 334 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 STK19P49842 368 aaPredicted RBP13.61□□□□□ -0.23
RTF1-201ENST00000389629 OR2G6Q5TZ20 316 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 ARSKQ6UWY0 536 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 SERINC5Q86VE9 423 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 CMTM8Q8IZV2 173 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 NDC1Q9BTX1 674 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 OR10A4Q9H209 315 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 NCR1O76036 304 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 SLC35G4P0C7Q5 338 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 MTNR1AP48039 350 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 VEZF1Q14119 521 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 RPS26P11Q5JNZ5 115 aaPredicted RBP13.61□□□□□ -0.23
RTF1-201ENST00000389629 SBSNQ6UWP8 590 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 LRRN1Q6UXK5 716 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 PDZD3Q86UT5 571 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 PJA1Q8NG27 643 aa13.61□□□□□ -0.23
RTF1-201ENST00000389629 HUS1BQ8NHY5 278 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms