RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 OXR1Q8N573 874 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 GOT1L1Q8NHS2 421 aaPredicted RBP15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 OR8D1Q8WZ84 308 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 SLC6A16Q9GZN6 736 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 MMP28Q9H239 520 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 OSGEPL1Q9H4B0 414 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 CXorf36Q9H7Y0 433 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 DMRT3Q9NQL9 472 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 TAS2R9Q9NYW1 312 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 DYRK1BQ9Y463 629 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 CKAP5Q14008 2032 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 A0A0C4DFX4 3053 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 NUMA1Q14980 2115 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 PIPSLA2A3N6 862 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 RTCAO00442 366 aaKnown RBP15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 IDH3BO43837 385 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 GPR37L1O60883 481 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 BCHEP06276 602 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 HBQ1P09105 142 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 ITGA2P17301 1181 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 PRLHRP49683 370 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 CRB2Q5IJ48 1285 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 TRIM40Q6P9F5 258 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 UBE2J2Q8N2K1 259 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 GANCQ8TET4 914 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 TMEM203Q969S6 136 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 DTD2Q96FN9 168 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 TMEM38AQ9H6F2 299 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF221Q9UK13 617 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 IRAK3Q9Y616 596 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 MN1Q10571 1320 aaPredicted RBP15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 CHD9Q3L8U1 2897 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 A0A1W2PRB8 838 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 H3BN98 237 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 TPST2O60704 377 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 SEMA3DO95025 777 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 PRNPP04156 253 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 IFNW1P05000 195 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 FHP07954 510 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 LIPKQ5VXJ0 399 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 C11orf96Q7Z7L8 435 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 HOMEZQ8IX15 550 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 UBQLNLQ8IYU4 475 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 OR5AR1Q8NGP9 310 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 SUSD6Q92537 303 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 SLAMF7Q9NQ25 335 aa15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 LSM2Q9Y333 95 aaKnown RBP15.45■□□□□ 0.06
NKX3-1-201ENST00000380871 TLR4O00206 839 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 AP2A2O94973 939 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 SLITRK5O94991 958 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 C1orf105O95561 183 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 DAB2P98082 770 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 SLAMF1Q13291 335 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 FAM83HQ6ZRV2 1179 aaPredicted RBP15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 MEX3DQ86XN8 651 aaKnown RBP15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 GPR32P1Q8NGA4 272 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 BEX2Q9BXY8 128 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 TAAR2Q9P1P5 351 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 REV1Q9UBZ9 1251 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 SNX11Q9Y5W9 270 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 CLEC2LP0C7M8 214 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 ARAFP10398 606 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 CRYBB2P43320 205 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 ALDH9A1P49189 494 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 HMGA2P52926 109 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF33BQ06732 778 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 TMIGD1Q6UXZ0 262 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 CEACAM20Q6UY09 585 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 CCDC80Q76M96 950 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 ADCK2Q7Z695 626 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 FAM20CQ8IXL6 584 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 GPR65Q8IYL9 337 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 HORMAD2Q8N7B1 307 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 OR4D11Q8NGI4 311 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 PIK3R3Q92569 461 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 MAPKAP1Q9BPZ7 522 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 PLSCR3Q9NRY6 295 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 A0A1W2PQ09 198 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 PLD2O14939 933 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 SH3BP5O60239 455 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 SCG5P05408 212 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 ADRB3P13945 408 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 PCSK2P16519 638 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 RHCEP18577 417 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 S100A1P23297 94 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 GPR50Q13585 617 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 C9orf64Q5T6V5 341 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 FAM71E1Q6IPT2 247 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 DEF8Q6ZN54 512 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 FAM46DQ8NEK8 389 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 C9orf43Q8TAL5 461 aaPredicted RBP15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 FGF13Q92913 245 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 TTYH2Q9BSA4 534 aa15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 CNOT2Q9NZN8 540 aaKnown RBP15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 YARS2Q9Y2Z4 477 aaKnown RBP15.44■□□□□ 0.06
NKX3-1-201ENST00000380871 CARNS1A5YM72 827 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 SPINT1O43278 529 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 OR10H3O60404 316 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 SNX4O95219 450 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 FGF19O95750 216 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms