RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 MIER2Q8N344 545 aa17.61■□□□□ 0.41
SMN2-202ENST00000380742 OR9I1Q8NGQ6 314 aa17.61■□□□□ 0.41
SMN2-202ENST00000380742 ZCCHC14Q8WYQ9 949 aaKnown RBP17.61■□□□□ 0.41
SMN2-202ENST00000380742 C8orf44Q96CB5 159 aa17.61■□□□□ 0.41
SMN2-202ENST00000380742 PPCDCQ96CD2 204 aa17.61■□□□□ 0.41
SMN2-202ENST00000380742 ZNF764Q96H86 408 aaPredicted RBP17.61■□□□□ 0.41
SMN2-202ENST00000380742 CLMPQ9H6B4 373 aa17.61■□□□□ 0.41
SMN2-202ENST00000380742 SLC35C2Q9NQQ7 365 aa17.61■□□□□ 0.41
SMN2-202ENST00000380742 ZIM2Q9NZV7 527 aa17.61■□□□□ 0.41
SMN2-202ENST00000380742 SH3BP4Q9P0V3 963 aa17.61■□□□□ 0.41
SMN2-202ENST00000380742 LOC102723996A0A087X1L8 192 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 IGHV3-20A0A0C4DH32 117 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 SOCS6O14544 535 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 RRP8O43159 456 aaKnown RBP17.6■□□□□ 0.41
SMN2-202ENST00000380742 SLC22A3O75751 556 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 LAMP1P11279 417 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 RPL3P39023 403 aaKnown RBP17.6■□□□□ 0.41
SMN2-202ENST00000380742 FEN1P39748 380 aaKnown RBP17.6■□□□□ 0.41
SMN2-202ENST00000380742 STX1BP61266 288 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 SERTAD2Q14140 314 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 SQLEQ14534 574 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 DGAT2L6Q6ZPD8 337 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 CIDECQ96AQ7 238 aaPredicted RBP17.6■□□□□ 0.41
SMN2-202ENST00000380742 COQ8BQ96D53 544 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 MAPRE3Q9UPY8 281 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 ZNF780BQ9Y6R6 833 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 ACACAQ13085 2346 aa17.6■□□□□ 0.41
SMN2-202ENST00000380742 URB1O60287 2271 aaKnown RBP17.6■□□□□ 0.41
SMN2-202ENST00000380742 A8MUA0 341 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 MYO1GB0I1T2 1018 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 NKX2-8O15522 239 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 CPMP14384 443 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 CD1EP15812 388 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 CSNK2A2P19784 350 aaPredicted RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 CLNS1AP54105 237 aaKnown RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 IRX1P78414 480 aaPredicted RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 EEF1A2Q05639 463 aaKnown RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 CEBPEQ15744 281 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 SFT2D3Q587I9 215 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 CPTPQ5TA50 214 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 ATP1A1-AS1Q5TC04 95 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 KIRREL2Q6UWL6 708 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 CPEB2Q7Z5Q1 589 aaKnown RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 CAMKMTQ7Z624 323 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 FUNDC1Q8IVP5 155 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 CPSF7Q8N684 471 aaKnown RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 AMER2Q8N7J2 671 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 PPWD1Q96BP3 646 aaKnown RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 TESCQ96BS2 214 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 WDR77Q9BQA1 342 aaPredicted RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 SLAMF7Q9NQ25 335 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 SAR1AQ9NR31 198 aa17.59■□□□□ 0.41
SMN2-202ENST00000380742 PNO1Q9NRX1 252 aaKnown RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 NUP214P35658 2090 aaPredicted RBP17.59■□□□□ 0.41
SMN2-202ENST00000380742 SLC35E2P0CK97 266 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 PORP16435 677 aaPredicted RBP17.58■□□□□ 0.4
SMN2-202ENST00000380742 PTGER1P34995 402 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 STT3AP46977 705 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 OR4D2P58180 307 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 PHC1P78364 1004 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 TLE3Q04726 772 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 BIKQ13323 160 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 PGS1Q32NB8 556 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 SPANXN4Q5MJ08 99 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 CPZQ66K79 652 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 RAB43Q86YS6 212 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 CCDC116Q8IYX3 515 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 ST13P4Q8IZP2 240 aaPredicted RBP17.58■□□□□ 0.4
SMN2-202ENST00000380742 OR11G2Q8NGC1 345 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 SUN3Q8TAQ9 357 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 NACC2Q96BF6 587 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 PRPF18Q99633 342 aaKnown RBP17.58■□□□□ 0.4
SMN2-202ENST00000380742 DUSP26Q9BV47 211 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 NMUR2Q9GZQ4 415 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 C19orf25Q9UFG5 118 aaPredicted RBP17.58■□□□□ 0.4
SMN2-202ENST00000380742 ENTPD4Q9Y227 616 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 ARL2BPQ9Y2Y0 163 aa17.58■□□□□ 0.4
SMN2-202ENST00000380742 IGF2RP11717 2491 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 A0A1W2PQ72 361 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 CDC14CA4D256 554 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 TMEM8BA6NDV4 472 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 ZNF891A8MT65 544 aaPredicted RBP17.57■□□□□ 0.4
SMN2-202ENST00000380742 PCDH17O14917 1159 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 PDPK1O15530 556 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 IFNA16P05015 189 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 COX6A1P12074 109 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 EFNA1P20827 205 aaPredicted RBP17.57■□□□□ 0.4
SMN2-202ENST00000380742 ITPKBP27987 946 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 FRKP42685 505 aaPredicted RBP17.57■□□□□ 0.4
SMN2-202ENST00000380742 DGKQP52824 942 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 WNT3P56703 355 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 SRSF11Q05519 484 aaKnown RBP17.57■□□□□ 0.4
SMN2-202ENST00000380742 UBAP2LQ14157 1087 aaKnown RBP17.57■□□□□ 0.4
SMN2-202ENST00000380742 PCOLCEQ15113 449 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 FAM174BQ3ZCQ3 159 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 GKAP1Q5VSY0 366 aaPredicted RBP17.57■□□□□ 0.4
SMN2-202ENST00000380742 OR4F3Q6IEY1 312 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 MRGPREQ86SM8 312 aa17.57■□□□□ 0.4
SMN2-202ENST00000380742 LRRC25Q8N386 305 aaPredicted RBP17.57■□□□□ 0.4
SMN2-202ENST00000380742 KDF1Q8NAX2 398 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms