RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 LTN1O94822 1766 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 TRAV6A0A075B6T7 132 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 A0A1B0GVC2 190 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 FCER2P06734 321 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 GGT1P19440 569 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 ERP29P30040 261 aaKnown RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 PTGS2P35354 604 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF181Q2M3W8 571 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 KIAA0319Q5VV43 1072 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 GTF2IRD2BQ6EKJ0 949 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 XKRXQ6PP77 449 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 GTF2IRD2Q86UP8 949 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 SCML4Q8N228 414 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 ZBTB8BQ8NAP8 495 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 FUBP1Q96AE4 644 aaKnown RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 SMOXQ9NWM0 555 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 COL14A1Q05707 1796 aaKnown RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 APOL3O95236 402 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 FAM76BQ5HYJ3 339 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 LHFPL3Q86UP9 236 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 TRIM73Q86UV7 250 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 THAP4Q8WY91 577 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 GTPBP2Q9BX10 602 aaKnown RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 MROQ9BYG7 248 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 SMURF1Q9HCE7 757 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 GPRC5BQ9NZH0 403 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 PLCL2Q9UPR0 1127 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 SLC22A31A6NKX4 558 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 SCAMP2O15127 329 aaKnown RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 CLEC3AO75596 197 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 RBBP9O75884 186 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 KLF8O95600 359 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 STSP08842 583 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 SRCP12931 536 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 RNH1P13489 461 aaKnown RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 RPS3P23396 243 aaKnown RBP eCLIP15.36■□□□□ 0.051e-6■■■■□ 21.3
COL2A1-202ENST00000380518 PYCR1P32322 319 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 SPINT3P49223 89 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 RAB6CQ53S08 254 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 UNC5DQ6UXZ4 953 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 KCTD9Q7L273 389 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 CEACAM19Q7Z692 300 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 CASTOR1Q8WTX7 329 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 PGAP3Q96FM1 320 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 RAB6CQ9H0N0 254 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 DKKL1Q9UK85 242 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
COL2A1-202ENST00000380518 K7ERQ8 282 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 VNN2O95498 520 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 HEXBP07686 556 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 LHCGRP22888 699 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 LRIF1Q5T3J3 769 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TMEM225Q6GV28 225 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 AMIGO3Q86WK7 504 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TP53INP2Q8IXH6 220 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 C7orf57Q8NEG2 295 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TESCQ96BS2 214 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 PRR11Q96HE9 360 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-202ENST00000380518 MYRFLQ96LU7 910 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 HERPUD2Q9BSE4 406 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 KLF15Q9UIH9 416 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 A0A1W2PQU0 124 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 PTGESO14684 152 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 BPIP17213 487 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 MAP2K3P46734 347 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 MAN2A2P49641 1150 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TBRG1Q3YBR2 411 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 RTP2Q5QGT7 225 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF283Q8N7M2 679 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TXLNGYQ9BZA5 131 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 C11orf98E9PRG8 122 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TP53I11O14683 189 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 FARS2O95363 451 aaKnown RBP15.35■□□□□ 0.05
COL2A1-202ENST00000380518 NDUFV2P19404 249 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 UGT2B10P36537 528 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 GMPRP36959 345 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 MAGEA8P43361 318 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 FXYD6P3P58550 94 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 RPS15AP62244 130 aaKnown RBP15.35■□□□□ 0.05
COL2A1-202ENST00000380518 HS3ST5Q8IZT8 346 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 ACBD7Q8N6N7 88 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 ZSCAN4Q8NAM6 433 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-202ENST00000380518 KDM1BQ8NB78 822 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 SNIP1Q8TAD8 396 aaKnown RBP15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TRIB2Q92519 343 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TMEM125Q96AQ2 219 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 LRR1Q96L50 414 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 FEVQ99581 238 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 OR6C74A6NCV1 312 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 M0R233 179 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 OR7A10O76100 309 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 POU4F2Q12837 409 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 LRRC69Q6ZNQ3 347 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TEX26Q8N6G2 289 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 GATSQ8NAP1 163 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF471Q9BX82 626 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-202ENST00000380518 IL21RQ9HBE5 538 aa15.35■□□□□ 0.05
COL2A1-202ENST00000380518 TTC34A8MYJ7 566 aa15.34■□□□□ 0.05
COL2A1-202ENST00000380518 MANEALQ5VSG8 457 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms