RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 H2AFY2Q9P0M6 372 aaPredicted RBP11.29□□□□□ -0.6
NPHP4-202ENST00000378161 HES2Q9Y543 173 aa11.29□□□□□ -0.6
NPHP4-202ENST00000378161 A0A096LPI6 279 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF705GA8MUZ8 300 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 SLC19A2O60779 497 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ARIH2O95376 493 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ANXA5P08758 320 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 C21orf33P30042 268 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 DCTP40126 519 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 CLCNKAP51800 687 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 NKX6-1P78426 367 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 JAG1P78504 1218 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 SMN1Q16637 294 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 HFEQ30201 348 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 WSCD1Q658N2 575 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ANKRD46Q86W74 232 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 NETO2Q8NC67 525 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 OR4M1Q8NGD0 313 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ST7LQ8TDW4 575 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 GLYATL2Q8WU03 294 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 TSPEARQ8WU66 669 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ITCHQ96J02 903 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 RHOVQ96L33 236 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 PRO1933Q9H354 126 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 GAR1Q9NY12 217 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 KLRG2A4D1S0 409 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 FSHRP23945 695 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 APEX1P27695 318 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 CRABP1P29762 137 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 PITPNAQ00169 270 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 NADSYN1Q6IA69 706 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 CEP68Q76N32 757 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF567Q8N184 647 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 DNAJB3Q8WWF6 145 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 HSPA12BQ96MM6 686 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 KCNC2Q96PR1 638 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 FBRSL1Q9HCM7 1045 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 EMCNQ9ULC0 261 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 CNTN6Q9UQ52 1028 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 PCDHGA1Q9Y5H4 931 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 SMCO3A2RU48 225 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 FAM170BA6NMN3 283 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 F5H5T6 163 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 EDIL3O43854 480 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 GMFGO60234 142 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 DLX3O60479 287 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 TXNDC12O95881 172 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 CSF3P09919 207 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 NME1P15531 152 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ANXA7P20073 488 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 GTF2A2P52657 109 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 RAP2BP61225 183 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 GANABQ14697 944 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 UBXN11Q5T124 520 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 THEM4Q5T1C6 240 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 GPR158Q5T848 1215 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 SCIMPQ6UWF3 145 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF551Q7Z340 670 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 NLGN4YQ8NFZ3 816 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 TWIST2Q8WVJ9 160 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 TEFMQ96QE5 360 aaKnown RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 FZD8Q9H461 694 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 WDR26Q9H7D7 661 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 AKTIPQ9H8T0 292 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 EQTNQ9NQ60 294 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 CCL15-CCL14A0A0B4J2E2 113 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ANKRD28O15084 1053 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 GPR182O15218 404 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 SLC28A2O43868 658 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 PCDHGA12O60330 932 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 CYP17A1P05093 508 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ACAA1P09110 424 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 RFX2P48378 723 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 BEX3Q00994 111 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 PLA2G7Q13093 441 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 MAD2L1Q13257 205 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 CCL15Q16663 113 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM200AQ86VY9 491 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF321PQ8N8H1 164 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 MTMR14Q8NCE2 650 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 DPH7Q9BTV6 452 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 WNT5BQ9H1J7 359 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ABHD16BQ9H3Z7 469 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 RGCCQ9H4X1 137 aa11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF629Q9UEG4 869 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-202ENST00000378161 ACOD1A6NK06 481 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 DPYSL4O14531 572 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 OR7A17O14581 309 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 TGOLN2O43493 480 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 CIDEAO60543 219 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 ALDH1A1P00352 501 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 ITGAMP11215 1152 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 NDUFB7P17568 137 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 ATP5C1P36542 298 aaKnown RBP11.27□□□□□ -0.6
NPHP4-202ENST00000378161 PIGAP37287 484 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 SLC11A2P49281 568 aa11.27□□□□□ -0.6
NPHP4-202ENST00000378161 OR4D2P58180 307 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms