RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 YIPF4Q9BSR8 244 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 XIRP1Q702N8 1843 aaKnown RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 PDE4DIPQ5VU43 2346 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 A0A1W2PPL8 197 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 SCAMP2O15127 329 aaKnown RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ARPC5O15511 151 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 RGS9O75916 674 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ZNF432O94892 652 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 INHBBP09529 407 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 MTHFD2P13995 350 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ZNF10P21506 573 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 MMP12P39900 470 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 MASP1P48740 699 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 CCR4P51679 360 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 VSX2P58304 361 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 RAB5BP61020 215 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ARF5P84085 180 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ZNF91Q05481 1191 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 FAM76BQ5HYJ3 339 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 METTL11BQ5VVY1 283 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ELP2Q6IA86 826 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 RBPMSQ93062 196 aaKnown RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ARMC5Q96C12 935 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 RHBDF1Q96CC6 855 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 EGLN2Q96KS0 407 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TM9SF2Q99805 663 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 SYNDIG1Q9H7V2 258 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TEX10Q9NXF1 929 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 SCP2D1Q9UJQ7 156 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ACSL6Q9UKU0 697 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 PCDHGA6Q9Y5G7 932 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 B4DXG7 233 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 FMO6PO60774 539 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 MTX2O75431 263 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ITGA3P26006 1051 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ARFIP1P53367 373 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 SP140Q13342 867 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 XKR7Q5GH72 579 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TIGD3Q6B0B8 471 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TMEM220Q6QAJ8 160 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TMEM207Q6UWW9 146 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 OR4K5Q8NGD3 323 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 STOML3Q8TAV4 291 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 CIDECQ96AQ7 238 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ZNF419Q96HQ0 510 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 NTMT1Q9BV86 223 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ZNF416Q9BWM5 594 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ACPTQ9BZG2 426 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 GSX2Q9BZM3 304 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 C14orf105Q9NVL8 296 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 CKLFQ9UBR5 152 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 C5orf51A6NDU8 294 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 INPPL1O15357 1258 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 RCBTB2O95199 551 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 HIST1H2ABP04908 130 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 HLA-EP13747 358 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 EDNRAP25101 427 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 GIFP27352 417 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 HOXA11P31270 313 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 PSPHP78330 225 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 RGS1Q08116 209 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 SEC23BQ15437 767 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ZNF791Q3KP31 576 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ADGRF1Q5T601 910 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 NDUFAF5Q5TEU4 345 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 HIST3H2AQ7L7L0 130 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 SHFQ7M4L6 423 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 GPR142Q7Z601 462 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TMED4Q7Z7H5 227 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 GID4Q8IVV7 300 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 GPALPP1Q8IXQ4 340 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 BEST4Q8NFU0 473 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 HIST1H2ACQ93077 130 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 UQCC2Q9BRT2 126 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 RHBGQ9H310 441 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TMEM185BQ9H7F4 350 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TXNL4BQ9NX01 149 aaKnown RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 MROH6A6NGR9 719 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 LRRTM2O43300 516 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 PRAF2O60831 178 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TGM6O95932 706 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 CKBP12277 381 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ATP1B2P14415 290 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ETV3P41162 512 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TPMTP51580 245 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 CAV3P56539 151 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 KCNC3Q14003 757 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 ATXN7L3Q14CW9 347 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 TAF13Q15543 124 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 METTL2BQ6P1Q9 378 aaKnown RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 RNF180Q86T96 592 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 DBF4BQ8NFT6 615 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 OR52P1PQ8NH57 321 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 NT5C3BQ969T7 300 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 CD180Q99467 661 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 P2RY13Q9BPV8 354 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 BHLHE41Q9C0J9 482 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 PLCXD1Q9NUJ7 323 aa8.66□□□□□ -1.02
CRNKL1-201ENST00000377327 OR6C2Q9NZP2 312 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms