RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 GADD45AP24522 165 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 G0S2P27469 103 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 DCTP40126 519 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 KCNJ3P48549 501 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 POLR2JP52435 117 aaKnown RBP14.81□□□□□ -0.04
FXN-201ENST00000377270 IL2P60568 153 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 RHOAP61586 193 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 RRAS2P62070 204 aaPredicted RBP14.81□□□□□ -0.04
FXN-201ENST00000377270 PUM1Q14671 1186 aaKnown RBP eCLIP14.81□□□□□ -0.04
FXN-201ENST00000377270 LARS2Q15031 903 aaKnown RBP14.81□□□□□ -0.04
FXN-201ENST00000377270 PON3Q15166 354 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 NKG7Q16617 165 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 DGKKQ5KSL6 1271 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 ATXN7L2Q5T6C5 722 aaPredicted RBP14.81□□□□□ -0.04
FXN-201ENST00000377270 C16orf54Q6UWD8 224 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 RTL4Q6ZR62 310 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 SPATA19Q7Z5L4 167 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 DNAJB7Q7Z6W7 309 aaPredicted RBP14.81□□□□□ -0.04
FXN-201ENST00000377270 TMEM179BQ7Z7N9 219 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 KRT78Q8N1N4 520 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 TMEM132CQ8N3T6 1108 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 OR8D4Q8NGM9 314 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 ESAMQ96AP7 390 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 LINGO1Q96FE5 620 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 Q96MT0 163 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 PFDN5Q99471 154 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 ZPBPQ9BS86 351 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 CFHR5Q9BXR6 569 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 LHX3Q9UBR4 397 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 RNF6Q9Y252 685 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 APOC3P02656 99 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 TNFSF8P32971 234 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 HNMTP50135 292 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 DEFA6Q01524 100 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 SCN1BQ07699 218 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 ASAH1Q13510 395 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 RBMS2Q15434 407 aaKnown RBP14.81□□□□□ -0.04
FXN-201ENST00000377270 KLHL17Q6TDP4 642 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 RAB11FIP2Q7L804 512 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 ADHFE1Q8IWW8 467 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 MS4A15Q8N5U1 240 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 SLC22A12Q96S37 553 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 TREX2Q9BQ50 279 aaPredicted RBP14.81□□□□□ -0.04
FXN-201ENST00000377270 SYNDIG1Q9H7V2 258 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 AIG1Q9NVV5 245 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 LYARQ9NX58 379 aaKnown RBP14.81□□□□□ -0.04
FXN-201ENST00000377270 ANKRD12Q6UB98 2062 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 ANKRD36A6QL64 1941 aa14.81□□□□□ -0.04
FXN-201ENST00000377270 IQCF5A8MTL0 148 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 SLC31A2O15432 143 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 FAM20BO75063 409 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 WDR47O94967 919 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PRAMEF12O95522 483 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 CXCL10P02778 98 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 TMEM11P17152 192 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 CTPS1P17812 591 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PRDX3P30048 256 aaKnown RBP14.8□□□□□ -0.04
FXN-201ENST00000377270 CTSKP43235 329 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PPP3CCP48454 512 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 MRPL19P49406 292 aaKnown RBP14.8□□□□□ -0.04
FXN-201ENST00000377270 UFM1P61960 85 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 TPGS2Q68CL5 300 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 ASPGQ86U10 573 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 SLC9B2Q86UD5 537 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 CD200R1Q8TD46 325 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 NR4A3Q92570 626 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 NARS2Q96I59 477 aaKnown RBP14.8□□□□□ -0.04
FXN-201ENST00000377270 BBS4Q96RK4 519 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 ACTR8Q9H981 624 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PCDHGB7Q9Y5F8 929 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PCDHGA6Q9Y5G7 932 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PCDHGA5Q9Y5G8 931 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PCDHGA1Q9Y5H4 931 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 LOC100506127A0A0U1RQW1 187 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 A8MXK9 166 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 SELENOFO60613 162 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 SOD2P04179 222 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 H2AFB1P0C5Y9 115 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 H2AFB2P0C5Z0 115 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 RAB3BP20337 219 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 TAS2R60P59551 318 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 SOWAHCQ53LP3 525 aaPredicted RBP14.8□□□□□ -0.04
FXN-201ENST00000377270 SLC35F1Q5T1Q4 408 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PDZK1Q5T2W1 519 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 GPSM1Q86YR5 675 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 AKR7LQ8NHP1 331 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 GORASP2Q9H8Y8 452 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.8□□□□□ -0.04
FXN-201ENST00000377270 UTS2RQ9UKP6 389 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 PKP3Q9Y446 797 aa14.8□□□□□ -0.04
FXN-201ENST00000377270 K7ERQ8 282 aa14.79□□□□□ -0.04
FXN-201ENST00000377270 MMP20O60882 483 aa14.79□□□□□ -0.04
FXN-201ENST00000377270 MITFO75030 526 aaPredicted RBP14.79□□□□□ -0.04
FXN-201ENST00000377270 SSTR2P30874 369 aa14.79□□□□□ -0.04
FXN-201ENST00000377270 SPAM1P38567 509 aa14.79□□□□□ -0.04
FXN-201ENST00000377270 MTPNP58546 118 aa14.79□□□□□ -0.04
FXN-201ENST00000377270 KCNJ10P78508 379 aa14.79□□□□□ -0.04
FXN-201ENST00000377270 GBX1Q14549 363 aa14.79□□□□□ -0.04
FXN-201ENST00000377270 RBBP7Q16576 425 aa14.79□□□□□ -0.04
FXN-201ENST00000377270 INO80DQ53TQ3 878 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms