RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 C11orf96Q7Z7L8 435 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 ANKRD53Q8N9V6 530 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 SLC35B4Q969S0 331 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 TMEM80Q96HE8 168 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 SLC30A2Q9BRI3 323 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 RHBGQ9H310 441 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 NDOR1Q9UHB4 597 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 IRAK3Q9Y616 596 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 MTCL1Q9Y4B5 1905 aaKnown RBP24.01■■□□□ 1.43
C9orf40-201ENST00000376854 HMGN4O00479 90 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 B4GALT2O60909 372 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 CEBPBP17676 345 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 OPRD1P41143 372 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 MEDAGQ5VYS4 303 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 CASP12Q6UXS9 341 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 PDZD3Q86UT5 571 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 ZNF354BQ96LW1 612 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 SDHCQ99643 169 aaPredicted RBP24.01■■□□□ 1.43
C9orf40-201ENST00000376854 ASPNQ9BXN1 380 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 MS4A8Q9BY19 250 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 SEMA3GQ9NS98 782 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 POU2F3Q9UKI9 436 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 TMEM98Q9Y2Y6 226 aa24.01■■□□□ 1.43
C9orf40-201ENST00000376854 A0A075B6Q4 140 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 CAPN5O15484 640 aaPredicted RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 CYP17A1P05093 508 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 ADH5P11766 374 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 TMEM201Q5SNT2 666 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 C12orf73Q69YU5 71 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 WDR53Q7Z5U6 358 aaPredicted RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 DCUN1D3Q8IWE4 304 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 NATD1Q8N6N6 113 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 OR4D11Q8NGI4 311 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 POF1BQ8WVV4 589 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 EXOSC8Q96B26 276 aaKnown RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 DHRS1Q96LJ7 313 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 POLR2J3Q9H1A7 115 aaKnown RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 SIRT3Q9NTG7 399 aaPredicted RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 ANHXE9PGG2 379 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 SLC9A3R1O14745 358 aaPredicted RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 VEGFDO43915 354 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 TBX19O60806 448 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 COQ9O75208 318 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 CSO75390 466 aaKnown RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 APOA1P02647 267 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 KCNJ5P48544 419 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 DPTQ07507 201 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 SPHARQ15513 63 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 LRIT3Q3SXY7 679 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 TMEM53Q6P2H8 277 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 CACTIN-AS1Q8N1I8 211 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 WFIKKN2Q8TEU8 576 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 SMPDL3AQ92484 453 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 AIF1LQ9BQI0 150 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 WFDC6Q9BQY6 131 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 C11orf49Q9H6J7 331 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 CUEDC1Q9NWM3 386 aaPredicted RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 ERVK13-1Q9NX77 482 aa24■■□□□ 1.43
C9orf40-201ENST00000376854 WBP11Q9Y2W2 641 aaKnown RBP24■■□□□ 1.43
C9orf40-201ENST00000376854 KIAA0355O15063 1070 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 CD72P21854 359 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 CTNNB1P35222 781 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 PCBP4P57723 403 aaKnown RBP23.99■■□□□ 1.43
C9orf40-201ENST00000376854 NCF4Q15080 339 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 PGBD2Q6P3X8 592 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 KRT73Q86Y46 540 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 TFGQ92734 400 aaPredicted RBP23.99■■□□□ 1.43
C9orf40-201ENST00000376854 NXPE3Q969Y0 559 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 TEFMQ96QE5 360 aaKnown RBP23.99■■□□□ 1.43
C9orf40-201ENST00000376854 ZNF607Q96SK3 696 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 SMURF1Q9HCE7 757 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 C14orf119Q9NWQ9 140 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 SEC14L3Q9UDX4 400 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 RPL36Q9Y3U8 105 aaKnown RBP23.99■■□□□ 1.43
C9orf40-201ENST00000376854 CHD9Q3L8U1 2897 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 KIAA0100Q14667 2235 aaKnown RBP23.99■■□□□ 1.43
C9orf40-201ENST00000376854 ADRB3P13945 408 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 RPS19P39019 145 aaKnown RBP23.99■■□□□ 1.43
C9orf40-201ENST00000376854 TARDBPQ13148 414 aaKnown RBP eCLIP23.99■■□□□ 1.43
C9orf40-201ENST00000376854 CCDC32Q9BV29 185 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 C3orf14Q9HBI5 128 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 DYRK4Q9NR20 520 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 SNX11Q9Y5W9 270 aa23.99■■□□□ 1.43
C9orf40-201ENST00000376854 FEZF1A0PJY2 475 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 TNFSF8P32971 234 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 TIE1P35590 1138 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 CASP3P42574 277 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 FNDC3BQ53EP0 1204 aaKnown RBP23.98■■□□□ 1.43
C9orf40-201ENST00000376854 BCDIN3DQ7Z5W3 292 aaKnown RBP23.98■■□□□ 1.43
C9orf40-201ENST00000376854 TCEANCQ8N8B7 351 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 FLCNQ8NFG4 579 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 ST13P5Q8NFI4 369 aaPredicted RBP23.98■■□□□ 1.43
C9orf40-201ENST00000376854 OR8J1Q8NGP2 316 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 MND1Q9BWT6 205 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 PELI2Q9HAT8 420 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 A8MU76 341 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 SLC28A2O43868 658 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 PCYT1AP49585 367 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 ZNF91Q05481 1191 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 C9orf64Q5T6V5 341 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms