RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 GPR34Q9UPC5 381 aa13.02□□□□□ -0.33
C9orf47-203ENST00000375851 MT-ND2P03891 347 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 SDC1P18827 310 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 USP53Q70EK8 1073 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 TMEM125Q96AQ2 219 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 ECHDC3Q96DC8 303 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 SLC22A12Q96S37 553 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 TPSD1Q9BZJ3 242 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 FBRSQ9HAH7 460 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 SMIM30A4D0T7 59 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 HHLA1C9JL84 531 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 HCRTR2O43614 444 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 KLKB1P03952 638 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 HLCSP50747 726 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 ZNF675Q8TD23 568 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 DTD2Q96FN9 168 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 SLC22A4Q9H015 551 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 ANKMY1Q9P2S6 941 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 GRHPRQ9UBQ7 328 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 SEC14L4Q9UDX3 406 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 MKLN1Q9UL63 735 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 ANKRD36CQ5JPF3 1778 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 OR52A4PA6NMU1 304 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 CCRL2O00421 344 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
C9orf47-203ENST00000375851 MT-ND5P03915 603 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 GSTT2BP0CG30 244 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 CBX5P45973 191 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 MAP2K4P45985 399 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 RNF144AP50876 292 aaPredicted RBP13.01□□□□□ -0.33
C9orf47-203ENST00000375851 ZNF829Q3KNS6 432 aaPredicted RBP13.01□□□□□ -0.33
C9orf47-203ENST00000375851 NAGSQ8N159 534 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 OR2T33Q8NG76 320 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 NETO1Q8TDF5 533 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 G6PC3Q9BUM1 346 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 NTMT1Q9BV86 223 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 C20orf27Q9GZN8 174 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 RMI1Q9H9A7 625 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 MARCH5Q9NX47 278 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 KLHL42Q9P2K6 505 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 GNG8Q9UK08 70 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 CNOT11Q9UKZ1 510 aaKnown RBP13.01□□□□□ -0.33
C9orf47-203ENST00000375851 PMF1-BGLAPU3KQ54 211 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 NHSL1Q5SYE7 1610 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 A0A1B0GVT2 93 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 THEGLP0DJG4 465 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 HOXD8P13378 290 aaPredicted RBP13.01□□□□□ -0.33
C9orf47-203ENST00000375851 ZNF20P17024 532 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 F8A1P23610 371 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 MAPK14Q16539 360 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 QSOX2Q6ZRP7 698 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 IFT46Q9NQC8 304 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 TMEM45AQ9NWC5 275 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 SARDHQ9UL12 918 aa13.01□□□□□ -0.33
C9orf47-203ENST00000375851 EXOSC1Q9Y3B2 195 aaKnown RBP13.01□□□□□ -0.33
C9orf47-203ENST00000375851 WASH3PC4AMC7 463 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 GPR37L1O60883 481 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 CYB5AP00167 134 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 CKMT1AP12532 417 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 HNRNPA2B1P22626 353 aaKnown RBP13□□□□□ -0.33
C9orf47-203ENST00000375851 CASRP41180 1078 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 SLC6A9P48067 706 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 DCDC1P59894 354 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 DUS1LQ6P1R4 473 aaKnown RBP13□□□□□ -0.33
C9orf47-203ENST00000375851 PGBD5Q8N414 524 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 FANK1Q8TC84 345 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 HCAR2Q8TDS4 363 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 B3GNT4Q9C0J1 378 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 TJP1Q07157 1748 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 LILRB3O75022 631 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 OR2B3O76000 313 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 PABPC4LP0CB38 370 aaKnown RBP13□□□□□ -0.33
C9orf47-203ENST00000375851 MAGEA3P43357 314 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 GCGRP47871 477 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 OR2B6P58173 313 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 HHEXQ03014 270 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 SEMA3BQ13214 749 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 FIGNL1Q6PIW4 674 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 OR2L5Q8NG80 312 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 UBXN10Q96LJ8 280 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 HIST1H2AAQ96QV6 131 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 ARMC1Q9NVT9 282 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 GPR45Q9Y5Y3 372 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 LAMA4Q16363 1823 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 APBB3O95704 486 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 RETP07949 1114 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 ENTPD1P49961 510 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 TMBIM6P55061 237 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 SPATC1Q76KD6 591 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 OR6N1Q8NGY5 312 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 CDCA3Q99618 268 aaPredicted RBP13□□□□□ -0.33
C9orf47-203ENST00000375851 ACPTQ9BZG2 426 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 TMEM181Q9P2C4 612 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 MROH6A6NGR9 719 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 CYP17A1P05093 508 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 HOXC12P31275 282 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 RGNQ15493 299 aa13□□□□□ -0.33
C9orf47-203ENST00000375851 TMEM173Q86WV6 379 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms