RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 NT5EP21589 574 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 CXCR1P25024 350 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 VGLL4Q14135 290 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 CBARPQ8N350 705 aaPredicted RBP9.77□□□□□ -0.84
PTCH1-204ENST00000375290 ACBD4Q8NC06 268 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 RNF128Q8TEB7 428 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 AMBNQ9NP70 447 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 TMPRSS11EQ9UL52 423 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 C17orf113A0A1B0GUU1 675 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 SIX3O95343 332 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 GSRP00390 522 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 PGAM2P15259 253 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 SPRED1Q7Z699 444 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 ZSCAN1Q8NBB4 408 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 PDLIM5Q96HC4 596 aaKnown RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 CNTNAP3BQ96NU0 1288 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 OR51J1Q9H342 316 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 GPSM3Q9Y4H4 160 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 LRRC72A6NJI9 287 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 IFNA5P01569 189 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 GPR19Q15760 415 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 SCGB2B2Q4G0G5 96 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 CADM2Q8N3J6 435 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 CCDC71LQ8N9Z2 235 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 FCRL1Q96LA6 429 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM74Q96NL1 305 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 PPIL3Q9H2H8 161 aaKnown RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 A8MVJ9 347 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 HLA-DMAP28067 261 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 PSMD8P48556 350 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 CRHR2Q13324 411 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 FGL2Q14314 439 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 LARP4Q71RC2 724 aaKnown RBP eCLIP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF565Q8N9K5 539 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 OR9A1PQ8NGU1 263 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF559Q9BR84 538 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 ERVK-18Q9QC07 812 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 CROCCQ5TZA2 2017 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 OR51F1A6NGY5 319 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 GPR89AB7ZAQ6 455 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 F5H5P2 479 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 EEF1E1O43324 174 aaKnown RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 IFNA10P01566 189 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 GPR89BP0CG08 455 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 CBFBQ13951 182 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 MFSD8Q8NHS3 518 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 ATG10Q9H0Y0 220 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 CFAP97Q9P2B7 532 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 GNG8Q9UK08 70 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 FAM155AB1AL88 458 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 VIPR1P32241 457 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 NFATC2Q13469 925 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 GPR149Q86SP6 731 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 CERS5Q8N5B7 392 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 OR51D1Q8NGF3 324 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 NTMT1Q9BV86 223 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 STRA6Q9BX79 667 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 OR51I1Q9H343 314 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 ELAC1Q9H777 363 aaKnown RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 C19orf12Q9NSK7 152 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 TNFRSF10AO00220 468 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 TOR1AO14656 332 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 SCAMP2O15127 329 aaKnown RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 PPP3CBP16298 524 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 NKX6-1P78426 367 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 KCNJ8Q15842 424 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 MS4A13Q5J8X5 152 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 UNQ6126/PRO20091Q6UXV3 157 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 IQCHQ86VS3 1027 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 EMID1Q96A84 441 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-204ENST00000375290 KLRG1Q96E93 195 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 NDOR1Q9UHB4 597 aa9.77□□□□□ -0.85
PTCH1-204ENST00000375290 GOLGA4Q13439 2230 aaKnown RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 VEGFDO43915 354 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PIPP12273 146 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 GINS1Q14691 196 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 GGTA1PQ4G0N0 100 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 DESI1Q6ICB0 168 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 NRG4Q8WWG1 115 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 WDR45Q9Y484 360 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 DCTP40126 519 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 RAB8AP61006 207 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 AWAT2Q6E213 333 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TICAM1Q8IUC6 712 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 LSM14AQ8ND56 463 aaKnown RBP9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM125Q96AQ2 219 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ANKRD19PQ9H560 264 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM150CB9EJG8 249 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 SLC5A2P31639 672 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 NOVP48745 357 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 HK3P52790 923 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 DGKQP52824 942 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 OR12D2P58182 307 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ARSKQ6UWY0 536 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF101Q8IZC7 436 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 ADGRG5Q8IZF4 528 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 PARP16Q8N5Y8 322 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 LRR1Q96L50 414 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 TNKS2Q9H2K2 1166 aa9.76□□□□□ -0.85
PTCH1-204ENST00000375290 MRPS23Q9Y3D9 190 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms