RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 OSMP13725 252 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 CD6P30203 668 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 NTSR1P30989 418 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 SOX6P35712 828 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 WASP42768 502 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 TSFMP43897 325 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 CCT3P49368 545 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 CRISP1P54107 249 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 PCBP4P57723 403 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 VBP1P61758 197 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 RPS21P63220 83 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 CYP4F2P78329 520 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 PRDX1Q06830 199 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 HSPB3Q12988 150 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 SLC9A5Q14940 896 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 SMN1Q16637 294 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 WSCD2Q2TBF2 565 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 ADPRMQ3LIE5 342 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 PUS10Q3MIT2 529 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 LEXMQ3ZCV2 418 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 TMEM196Q5HYL7 178 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 IER5LQ5T953 404 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 PRAMEF8Q5VWM4 474 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 PRAMEF7Q5VXH5 474 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 MEDAGQ5VYS4 303 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 ZNF776Q68DI1 518 aaPredicted RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 KIAA1161Q6NSJ0 714 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 TMEM64Q6YI46 380 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 IGFN1Q86VF2 1251 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 CCDC71Q8IV32 467 aaPredicted RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 OR6Q1Q8NGQ2 317 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 OR2L8Q8NGY9 312 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 ZNF675Q8TD23 568 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 GGHQ92820 318 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 DACH2Q96NX9 599 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 BBS4Q96RK4 519 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 RSPH9Q9H1X1 276 aaPredicted RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 ZDHHC4Q9NPG8 344 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 AKIP1Q9NQ31 210 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 TMEM184CQ9NVA4 438 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 CCDC59Q9P031 241 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 DAPK2Q9UIK4 370 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 ENTPD4Q9Y227 616 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 IRGMA1A4Y4 181 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 ZAR1LA6NP61 321 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 H7BY64 318 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 TAF4O00268 1085 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 UGT2B17O75795 530 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 KLHL18O94889 574 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 MFN2O95140 757 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 VIPP01282 170 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 TFPTP0C1Z6 253 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 NR2F1P10589 423 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 TNFRSF1BP20333 461 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 NR4A1P22736 598 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 NDUFS1P28331 727 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 EPHA2P29317 976 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 CD40LGP29965 261 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 S100A5P33763 92 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 AHRP35869 848 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 CRISP3P54108 245 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 CASP9P55211 416 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 SFSWAPQ12872 951 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 COX10Q12887 443 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 KRR1Q13601 381 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 INAQ16352 499 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 TNFAIP8L2Q6P589 184 aaPredicted RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 CASP12Q6UXS9 341 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 TSEN54Q7Z6J9 526 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 HDDC3Q8N4P3 179 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 C2orf73Q8N5S3 287 aaPredicted RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 HORMAD2Q8N7B1 307 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 MCFD2Q8NI22 146 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 NDNFQ8TB73 568 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 SLC38A5Q8WUX1 472 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 EXOSC8Q96B26 276 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 PRAP1Q96NZ9 151 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 GABRG3Q99928 467 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 NIPSNAP1Q9BPW8 284 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 BTBD2Q9BX70 525 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 DCSTAMPQ9H295 470 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 OSGEPL1Q9H4B0 414 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 NMNAT1Q9HAN9 279 aaPredicted RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 CACYBPQ9HB71 228 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 MRPS30Q9NP92 439 aaKnown RBP11.6□□□□□ -0.55
UBR4-203ENST00000375225 CALML5Q9NZT1 146 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 SLC23A2Q9UGH3 650 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 PRKAB1Q9Y478 270 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 KLK4Q9Y5K2 254 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 COLEC10Q9Y6Z7 277 aa11.6□□□□□ -0.55
UBR4-203ENST00000375225 PNMA8CA0A1B0GUJ8 204 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 ISPDA4D126 451 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 SNTNA6NMZ2 147 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 J3QRK9 145 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 MID1O15344 667 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 MAN1A2O60476 641 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 EGFP01133 1207 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 LCKP06239 509 aa11.59□□□□□ -0.55
UBR4-203ENST00000375225 CDH3P22223 829 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms