RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CNOT11Q9UKZ1 510 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 A0A1B0GVI7 797 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 F5H0A9 414 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 RBMXP38159 391 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 OR1E2P47887 323 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 GDI2P50395 445 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 ODF4Q2M2E3 257 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 ARSKQ6UWY0 536 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 UBE2Q1Q7Z7E8 422 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 MAGED1Q9Y5V3 778 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 HTR3EA5X5Y0 456 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 RBBP9O75884 186 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF8P17098 575 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 HERV-K104P61576 105 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 KCNC3Q14003 757 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 EOGTQ5NDL2 527 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 CLDN19Q8N6F1 224 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 MFSD2AQ8NA29 543 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 ITPKCQ96DU7 683 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 KCNN3Q9UGI6 736 aa11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 ZFR2Q9UPR6 939 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-202ENST00000374747 AGAP5A6NIR3 686 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 WASHC1A8K0Z3 465 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 WASH3PC4AMC7 463 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 FAAHO00519 579 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 KIAA0513O60268 411 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 UAP1L1Q3KQV9 507 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 RAB6CQ53S08 254 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 C10orf62Q5T681 223 aaPredicted RBP11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 SLC27A4Q6P1M0 643 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 WASH2PQ6VEQ5 465 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 SCD5Q86SK9 330 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 NRSN1Q8IZ57 195 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 METTL25Q8N6Q8 603 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 MGLLQ99685 303 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 RAB6CQ9H0N0 254 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 CSNK1G1Q9HCP0 422 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 EBF1Q9UH73 591 aa11.77□□□□□ -0.52
NPLOC4-202ENST00000374747 IFNA2P01563 188 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CKMT1AP12532 417 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CDKN1CP49918 316 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 LASP1Q14847 261 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CLCA4Q14CN2 919 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CMPK2Q5EBM0 449 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 SLC35F1Q5T1Q4 408 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 GLT8D1Q68CQ7 371 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 DCDC5Q6ZRR9 648 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 NSMAFQ92636 917 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CCDC32Q9BV29 185 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 TP63Q9H3D4 680 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CARS2Q9HA77 564 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 MEAF6Q9HAF1 191 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 WDR6Q9NNW5 1121 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 SDHAF3Q9NRP4 125 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CDC14AQ9UNH5 594 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 WDR45Q9Y484 360 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 A0A0J9YVX5 310 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 BLOC1S5-TXNDC5H3BN57 136 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 H2AFB2P0C5Z0 115 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 GTF2F2P13984 249 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CLCNKAP51800 687 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 UBXN2BQ14CS0 331 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 LRRC37A5PQ49AS3 106 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 CARM1Q86X55 608 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 FAM86B1Q8N7N1 296 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 MCHR1Q99705 422 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 DOHHQ9BU89 302 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 REEP4Q9H6H4 257 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 DLGAP4Q9Y2H0 992 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 PRKYO43930 277 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 UQCRC2P22695 453 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 PLEKHG7Q6ZR37 379 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 LINC01465Q8N7H1 131 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 TSTD1Q8NFU3 115 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 BBS10Q8TAM1 723 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 KLK6Q92876 244 aa11.77□□□□□ -0.53
NPLOC4-202ENST00000374747 BCKDHAP12694 445 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 RAB5BP61020 215 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 CDK10Q15131 360 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 DECR1Q16698 335 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 ZIC5Q96T25 663 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 PIP5K1AQ99755 562 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 MTG2Q9H4K7 406 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 TMEM185BQ9H7F4 350 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 MYNNQ9NPC7 610 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 NRXN2Q9P2S2 1712 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 APOC3P02656 99 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 GBAP04062 536 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 GSTM2P28161 218 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 AADACL4Q5VUY2 407 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 HACD2Q6Y1H2 254 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 CYP4V2Q6ZWL3 525 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 SLC29A4Q7RTT9 530 aa11.76□□□□□ -0.53
NPLOC4-202ENST00000374747 NPWQ8N729 165 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms