RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ENPP2Q13822 863 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 C10orf62Q5T681 223 aaPredicted RBP17.35■□□□□ 0.37
RXRB-202ENST00000374685 XAF1Q6GPH4 301 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 C6orf120Q7Z4R8 191 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 B3GNT8Q7Z7M8 397 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 DOK4Q8TEW6 326 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 NODALQ96S42 347 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 PCBD2Q9H0N5 130 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 RHBGQ9H310 441 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 SLC6A20Q9NP91 592 aa17.35■□□□□ 0.37
RXRB-202ENST00000374685 BTN3A3O00478 584 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 TPST2O60704 377 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 B4GALT2O60909 372 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 ZNF182P17025 639 aaPredicted RBP17.34■□□□□ 0.37
RXRB-202ENST00000374685 FEN1P39748 380 aaKnown RBP17.34■□□□□ 0.37
RXRB-202ENST00000374685 RFX4Q33E94 735 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 IQCCQ4KMZ1 466 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 RBM48Q5RL73 367 aaKnown RBP17.34■□□□□ 0.37
RXRB-202ENST00000374685 OR4C11Q6IEV9 310 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 ZNF540Q8NDQ6 660 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 GOT1L1Q8NHS2 421 aaPredicted RBP17.34■□□□□ 0.37
RXRB-202ENST00000374685 RPLP0P6Q8NHW5 317 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 LCN9Q8WX39 176 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 TMEM168Q9H0V1 697 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 KCNK12Q9HB15 430 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 EQTNQ9NQ60 294 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 CTPS2Q9NRF8 586 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 LYVE1Q9Y5Y7 322 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 PCDH17O14917 1159 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 PGRMC2O15173 223 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 FADS2O95864 444 aaKnown RBP17.34■□□□□ 0.37
RXRB-202ENST00000374685 UQCRC2P22695 453 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 POU1F1P28069 291 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 ALDH4A1P30038 563 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 SELENBP1Q13228 472 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 SKIV2LQ15477 1246 aaKnown RBP17.34■□□□□ 0.37
RXRB-202ENST00000374685 SFTPA2Q8IWL1 248 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 LGI4Q8N135 537 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 ANKK1Q8NFD2 765 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 OR10G2Q8NGC3 310 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 SLC38A5Q8WUX1 472 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 HMGB4Q8WW32 186 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 TMEM19Q96HH6 336 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 NIPSNAP1Q9BPW8 284 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 ANGPT4Q9Y264 503 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 SLC17A4Q9Y2C5 497 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 PCDHGB3Q9Y5G1 929 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 MDC1Q14676 2089 aaKnown RBP17.34■□□□□ 0.37
RXRB-202ENST00000374685 LRIT2A6NDA9 550 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 FAM20BO75063 409 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 CLPXO76031 633 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 CCNA2P20248 432 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 CERS1P27544 350 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 NCBP2P52298 156 aaKnown RBP eCLIP17.34■□□□□ 0.37
RXRB-202ENST00000374685 NUDT6P53370 316 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 OCA2Q04671 838 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 NPRL3Q12980 569 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 SLAMF1Q13291 335 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 KIAA1614Q5VZ46 1190 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 CCDC71Q8IV32 467 aaPredicted RBP17.34■□□□□ 0.37
RXRB-202ENST00000374685 CCDC116Q8IYX3 515 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 PATE1Q8WXA2 126 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 BBS4Q96RK4 519 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 ZNF347Q96SE7 839 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 TUBA1CQ9BQE3 449 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 C1QTNF7Q9BXJ2 289 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 S1PR5Q9H228 398 aa17.34■□□□□ 0.37
RXRB-202ENST00000374685 UGT2B11O75310 529 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 OR12D1P0DN82 309 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 PEBP1P30086 187 aaKnown RBP17.33■□□□□ 0.36
RXRB-202ENST00000374685 HSD17B2P37059 387 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 CCT3P49368 545 aaKnown RBP17.33■□□□□ 0.36
RXRB-202ENST00000374685 C18orf63Q68DL7 685 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 AHSA2Q719I0 299 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 WDR53Q7Z5U6 358 aaPredicted RBP17.33■□□□□ 0.36
RXRB-202ENST00000374685 RBM45Q8IUH3 476 aaKnown RBP17.33■□□□□ 0.36
RXRB-202ENST00000374685 TAGAPQ8N103 731 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 RIPOR3Q96MK2 946 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 RAD21L1Q9H4I0 556 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 ATG4BQ9Y4P1 393 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 DNMT3AQ9Y6K1 912 aaPredicted RBP17.33■□□□□ 0.36
RXRB-202ENST00000374685 RGS13O14921 159 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 SLC16A6O15403 523 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 SLC28A2O43868 658 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 JRKO75564 520 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 PKLRP30613 574 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 TNFRSF4P43489 277 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 IFITM2Q01629 132 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 FADDQ13158 208 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 ADAM15Q13444 863 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 TOR1AIP1Q5JTV8 583 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 KIAA1161Q6NSJ0 714 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 TMEM92Q6UXU6 159 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 DEF8Q6ZN54 512 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 IKBIPQ70UQ0 350 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 OR2L3Q8NG85 312 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 MRGPRX1Q96LB2 322 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 OR2M4Q96R27 311 aa17.33■□□□□ 0.36
RXRB-202ENST00000374685 ZNF300Q96RE9 604 aaPredicted RBP17.33■□□□□ 0.36
RXRB-202ENST00000374685 TIMM29Q9BSF4 260 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms