RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 GPR52Q9Y2T5 361 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 PRAMEF33A0A0G2JMD5 474 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 PRR35P0CG20 571 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 CD22P20273 847 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 PIK3CBP42338 1070 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 SUZ12Q15022 739 aaKnown RBP12.9□□□□□ -0.34
CLIC4-201ENST00000374379 CDC73Q6P1J9 531 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 CBLL1Q75N03 491 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 TMIEQ8NEW7 156 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 LGALS12Q96DT0 336 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 AMBRA1Q9C0C7 1298 aa12.9□□□□□ -0.34
CLIC4-201ENST00000374379 GTPBP1O00178 669 aaKnown RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 PPM1DO15297 605 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 RBBP4Q09028 425 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 GGTA1PQ4G0N0 100 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 PYDC2Q56P42 97 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 FRMD1Q8N878 549 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 FAM98AQ8NCA5 519 aaKnown RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 UHRF1Q96T88 793 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 MYO16Q9Y6X6 1858 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 TCRBV5S2A0A599 114 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 RNASET2O00584 256 aaKnown RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 SLC22A1O15245 554 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 BCAS1O75363 584 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF821O75541 412 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 HMGN2P05204 90 aaKnown RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 MAGEA10P43363 369 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF385BQ569K4 471 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 FIGNL1Q6PIW4 674 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 ZC3H14Q6PJT7 736 aaKnown RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 HORMAD2Q8N7B1 307 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 OR56A3Q8NH54 315 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF420Q8TAQ5 688 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF675Q8TD23 568 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 TSSK6Q9BXA6 273 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 GPR174Q9BXC1 333 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 HEBP2Q9Y5Z4 205 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 A0A0G2JMZ2 1700 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 A8MU76 341 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 H0Y8X5 98 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 EPHA2P29317 976 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 MC3RP41968 323 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 EMX1Q04741 257 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 MLIPQ5VWP3 458 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 PARM1Q6UWI2 310 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 FAM131AQ6UXB0 335 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 OR10H4Q8NGA5 316 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 SLC22A18Q96BI1 424 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 TAMM41Q96BW9 452 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 PRR14Q9BWN1 585 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 PBX4Q9BYU1 374 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 SH2B3Q9UQQ2 575 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 ENPP4Q9Y6X5 453 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 KRBA1A5PL33 1030 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 ARHGEF15O94989 841 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 MAP4K2Q12851 820 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 VEZF1Q14119 521 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 SLC15A4Q8N697 577 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 ZFP41Q8N8Y5 198 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 OR8J2Q8NGG1 315 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 OR9A2Q8NGT5 310 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 WDR92Q96MX6 357 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 MCHR1Q99705 422 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 APOOQ9BUR5 198 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 IFT27Q9BW83 186 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 NMNAT1Q9HAN9 279 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 GDE1Q9NZC3 331 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 TMPRSS11EQ9UL52 423 aa12.89□□□□□ -0.35
CLIC4-201ENST00000374379 MRPS33Q9Y291 106 aaKnown RBP12.89□□□□□ -0.35
CLIC4-201ENST00000374379 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-201ENST00000374379 GSTM2P28161 218 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 TALDO1P37837 337 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 DCDC1P59894 354 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 SKP1P63208 163 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 IL18R1Q13478 541 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 TSPYL5Q86VY4 417 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-201ENST00000374379 ZFP90Q8TF47 636 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 KLHL6Q8WZ60 621 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 CXorf36Q9H7Y0 433 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 TMEM9Q9P0T7 183 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 ZFC3H1O60293 1989 aaKnown RBP12.88□□□□□ -0.35
CLIC4-201ENST00000374379 SPTBP11277 2137 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 CCDC159P0C7I6 412 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 DDCP20711 480 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 SHHQ15465 462 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF829Q3KNS6 432 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-201ENST00000374379 C10orf62Q5T681 223 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-201ENST00000374379 DDI2Q5TDH0 399 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 MSRB3Q8IXL7 192 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 ACOT4Q8N9L9 421 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 PSD4Q8NDX1 1056 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 NDNFQ8TB73 568 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 DIRAS2Q96HU8 199 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 TMEM27Q9HBJ8 222 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 COMMD3Q9UBI1 195 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 GPR34Q9UPC5 381 aa12.88□□□□□ -0.35
CLIC4-201ENST00000374379 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms