RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 ANGPT1Q15389 498 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 ANKRD54Q6NXT1 300 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 STX19Q8N4C7 294 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 FAM181AQ8N9Y4 354 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 OR8K5Q8NH50 307 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 PANX1Q96RD7 426 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 HEXA-AS1Q9H8Q6 139 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 PLCXD1Q9NUJ7 323 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 CTSLP07711 333 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 OR56A5P0C7T3 313 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 HOXB3P14651 431 aaPredicted RBP16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 GBX2P52951 348 aaPredicted RBP16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 GPR85P60893 370 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 IRF8Q02556 426 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 ZNF273Q14593 569 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 PDZK1Q5T2W1 519 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 C19orf48Q6RUI8 117 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 HTR3DQ70Z44 454 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 QRFPRQ96P65 431 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 SNTG1Q9NSN8 517 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 TRANK1O15050 2925 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 ZNF98A6NK75 572 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 FABP7O15540 132 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 OLFM2O95897 454 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 OPN1SWP03999 348 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 RAF1P04049 648 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 RRASP10301 218 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 WDR5P61964 334 aaKnown RBP16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 DMC1Q14565 340 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 TIMM50Q3ZCQ8 353 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 TCEAL5Q5H9L2 206 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 ZNF783Q6ZMS7 281 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 SYT12Q8IV01 421 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 TCF25Q9BQ70 676 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 NTMT1Q9BV86 223 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 GALNT9Q9HCQ5 603 aa16.48■□□□□ 0.23
LDLRAP1-201ENST00000374338 K7ESM1 405 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 PROS1P07225 676 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 ACPPP15309 386 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 SOX3P41225 446 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 TPMTP51580 245 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 GRM7Q14831 915 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 GPR139Q6DWJ6 353 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 ASB11Q8WXH4 323 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 USP7Q93009 1102 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 GFM1Q96RP9 751 aaKnown RBP16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 FAM129BQ96TA1 746 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 CCM2Q9BSQ5 444 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 CMAHPQ9Y471 501 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 GON4LQ3T8J9 2241 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 WASH3PC4AMC7 463 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 LAMP1P11279 417 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 MAGEA2P43356 314 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 RAB25P57735 213 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 PFN3P60673 137 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 CLLU1Q5K131 121 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 C10orf62Q5T681 223 aaPredicted RBP16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 NOXRED1Q6NXP6 359 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 CNKSR3Q6P9H4 555 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 KLHL17Q6TDP4 642 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 TRIM46Q7Z4K8 759 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 METTL3Q86U44 580 aaKnown RBP16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 KRT73Q86Y46 540 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 RBPMSQ93062 196 aaKnown RBP16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 OPALINQ96PE5 141 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 TMEM245Q9H330 911 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 CSNK1G3Q9Y6M4 447 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 LAMA1P25391 3075 aa16.47■□□□□ 0.23
LDLRAP1-201ENST00000374338 SOCS5O75159 536 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 CD9P21926 228 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 MNX1P50219 401 aaPredicted RBP16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 CLCNKAP51800 687 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 TCEA2Q15560 299 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 GDPD4Q6W3E5 623 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 DDX53Q86TM3 631 aaKnown RBP16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 TBC1D20Q96BZ9 403 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 ZNF689Q96CS4 500 aaPredicted RBP16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 HSH2DQ96JZ2 352 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 HRASLS5Q96KN8 279 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 MGLLQ99685 303 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 RACGAP1Q9H0H5 632 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 SLC25A13Q9UJS0 675 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 SH2B3Q9UQQ2 575 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 FABP12A6NFH5 140 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 ARHGEF33A8MVX0 844 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 MAGEB17A8MXT2 336 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 KPNA3O00505 521 aaPredicted RBP16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 SLC16A8O95907 504 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 IL6P05231 212 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 CKMT1AP12532 417 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 ENGP17813 658 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 DNAJA1P31689 397 aaKnown RBP16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 MAP2K3P46734 347 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 RORCP51449 518 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 POLR2GP62487 172 aaKnown RBP eCLIP16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 GPR33Q49SQ1 333 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 MLIPQ5VWP3 458 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 ADIPOR2Q86V24 386 aa16.46■□□□□ 0.23
LDLRAP1-201ENST00000374338 OR4K1Q8NGD4 311 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms