RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TAGAPQ8N103 731 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 OR4D11Q8NGI4 311 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 OR2L8Q8NGY9 312 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 OR1E3Q8WZA6 343 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 ZBED6CLQ96FA7 236 aaPredicted RBP15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 COL21A1Q96P44 957 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 CDCA3Q99618 268 aaPredicted RBP15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 PITX2Q99697 317 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 GABARAPL3Q9BY60 117 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 DDX31Q9H8H2 851 aaKnown RBP15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 CTPS2Q9NRF8 586 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 ZCCHC3Q9NUD5 404 aaKnown RBP15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 TMEM9Q9P0T7 183 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 PRSS38A1L453 326 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 BTN3A3O00478 584 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 GASTP01350 101 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 IGFBP1P08833 259 aaPredicted RBP15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 VBP1P61758 197 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 TOR1AIP1Q5JTV8 583 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 KLHL35Q6PF15 583 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 DHRS4L2Q6PKH6 230 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 RPL3LQ92901 407 aaKnown RBP15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 SIPA1Q96FS4 1042 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 QRFPRQ96P65 431 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 ALPK1Q96QP1 1244 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 OR51I1Q9H343 314 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 THSD1Q9NS62 852 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 MSRAQ9UJ68 235 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 PCDHGA2Q9Y5H1 932 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 ENPP4Q9Y6X5 453 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 A0A1W2PR48 441 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 IFNA14P01570 189 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 CTHP32929 405 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 GRK3P35626 688 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 TMED1Q13445 227 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 CTF1Q16619 201 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 PROX2Q3B8N5 592 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 C11orf91Q3C1V1 193 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 WDR53Q7Z5U6 358 aaPredicted RBP15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 NDNFQ8TB73 568 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 MS4A6EQ96DS6 147 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 CNDP2Q96KP4 475 aaKnown RBP15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 AMDHD1Q96NU7 426 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 BBS4Q96RK4 519 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 QRSL1Q9H0R6 528 aaKnown RBP15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 NEUROD4Q9HD90 331 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 ENPP5Q9UJA9 477 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 GPR89AB7ZAQ6 455 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 CLEC3AO75596 197 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 DNAJB5O75953 348 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 SOX14O95416 240 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 GPR89BP0CG08 455 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 ITGA2P17301 1181 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 GGT2P36268 569 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 TNFRSF4P43489 277 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 SYT16Q17RD7 645 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 SHISA5Q8N114 240 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 ACOT4Q8N9L9 421 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 KCT2Q8NC54 265 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 FLCNQ8NFG4 579 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 TREX2Q9BQ50 279 aaPredicted RBP15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 LMAN2LQ9H0V9 348 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 ACOT13Q9NPJ3 140 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 EQTNQ9NQ60 294 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 SLC35C2Q9NQQ7 365 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 CLDND1Q9NY35 253 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 GPR83Q9NYM4 423 aa15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.13■□□□□ 0.01
CNKSR1-202ENST00000374253 A0A0J9YVX5 310 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 TRIM64BA6NI03 449 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 M0R3H8 397 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 CCNB2O95067 398 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 MFN2O95140 757 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 LASP1Q14847 261 aaKnown RBP15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 SLC9A5Q14940 896 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 SEC23BQ15437 767 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 TMEM107Q6UX40 140 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 SFTPA2Q8IWL1 248 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 DOK4Q8TEW6 326 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 LCN9Q8WX39 176 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 C16orf58Q96GQ5 468 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 COPS4Q9BT78 406 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 ALOXE3Q9BYJ1 711 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 TMEM168Q9H0V1 697 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 S1PR5Q9H228 398 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 ZNF556Q9HAH1 456 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 NMNAT1Q9HAN9 279 aaPredicted RBP15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 PREBQ9HCU5 417 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 APOBEC3BQ9UH17 382 aaKnown RBP15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 HSPE1-MOB4S4R3N1 261 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 DPM1O60762 260 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 HIST1H1TP22492 207 aaPredicted RBP15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 NCS1P62166 190 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 LSM11P83369 360 aaKnown RBP eCLIP15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 CACTIN-AS1Q8N1I8 211 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 CNRIP1Q96F85 164 aaPredicted RBP15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 SLC35G5Q96KT7 338 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 OR2M4Q96R27 311 aa15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 GPN2Q9H9Y4 310 aaPredicted RBP15.12■□□□□ 0.01
CNKSR1-202ENST00000374253 PRDM7Q9NQW5 492 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms