RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 IL18R1Q13478 541 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 KIR2DS5Q14953 304 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 DUSP7Q16829 419 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 SZRD1Q7Z422 152 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 ATG16L2Q8NAA4 619 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 HDAC2Q92769 488 aaKnown RBP18.51■□□□□ 0.55
HDAC1-201ENST00000373548 NMD3Q96D46 503 aaKnown RBP18.51■□□□□ 0.55
HDAC1-201ENST00000373548 SLC6A18Q96N87 628 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 EVA1BQ9NVM1 165 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 KIF17Q9P2E2 1029 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 DUSP12Q9UNI6 340 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 SH3GLB1Q9Y371 365 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 TRIOO75962 3097 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 NINQ8N4C6 2090 aa18.51■□□□□ 0.55
HDAC1-201ENST00000373548 GON4LQ3T8J9 2241 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 IGHV1OR15-9A0A0B4J2B8 117 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 TNFRSF11BO00300 401 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 C8orf89P0DMQ9 161 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 CYP4B1P13584 511 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 NUDT1P36639 197 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 LSSP48449 732 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 C1orf61Q13536 156 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 RAPSNQ13702 412 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 GPR19Q15760 415 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 RBM48Q5RL73 367 aaKnown RBP18.5■□□□□ 0.55
HDAC1-201ENST00000373548 C6orf141Q5SZD1 244 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 LAIR2Q6ISS4 152 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 TMEM64Q6YI46 380 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 CCDC116Q8IYX3 515 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 OR4C15Q8NGM1 316 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 KLHDC7BQ96G42 594 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 RSPO3Q9BXY4 272 aaPredicted RBP18.5■□□□□ 0.55
HDAC1-201ENST00000373548 OR51I1Q9H343 314 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 KRT84Q9NSB2 600 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 EXD2Q9NVH0 621 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 DDX18Q9NVP1 670 aaKnown RBP18.5■□□□□ 0.55
HDAC1-201ENST00000373548 ENTPD4Q9Y227 616 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 PRAMEF27A3QJZ7 478 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 FAM221BA6H8Z2 402 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 OR5K4A6NMS3 321 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 UGT2B11O75310 529 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 SMIM10L1P0DMW3 83 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 OR12D1P0DN82 309 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 CTSEP14091 401 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 PVRP15151 417 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 ITGA2P17301 1181 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 CD247P20963 164 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 CRHBPP24387 322 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 RYKP34925 604 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 FEN1P39748 380 aaKnown RBP18.5■□□□□ 0.55
HDAC1-201ENST00000373548 CLK3P49761 638 aaKnown RBP18.5■□□□□ 0.55
HDAC1-201ENST00000373548 FZD5Q13467 585 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 SIM2Q14190 667 aaPredicted RBP18.5■□□□□ 0.55
HDAC1-201ENST00000373548 OR5D16Q8NGK9 328 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 SMIM10Q96HG1 83 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 MAGED4Q96JG8 741 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 NPLQ9BXD5 320 aaPredicted RBP18.5■□□□□ 0.55
HDAC1-201ENST00000373548 ADNPQ9H2P0 1102 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 SEMA3GQ9NS98 782 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 ANKMY1Q9P2S6 941 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 ZNF451Q9Y4E5 1061 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 ENTPD2Q9Y5L3 495 aa18.5■□□□□ 0.55
HDAC1-201ENST00000373548 LOC105369274A0A096LPK9 316 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 LOC102723532A0A0G2JNH3 316 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 C2orf74A8MZ97 194 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 J3KTA2 159 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 DNAJB5O75953 348 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 MFN2O95140 757 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 CDH2P19022 906 aaPredicted RBP18.49■□□□□ 0.55
HDAC1-201ENST00000373548 CSNK2A2P19784 350 aaPredicted RBP18.49■□□□□ 0.55
HDAC1-201ENST00000373548 XCR1P46094 333 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 SPIBQ01892 262 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 FRMPD2BQ6IN97 320 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 OR4N4Q8N0Y3 316 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 ZCCHC10Q8TBK6 192 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 SFXN5Q8TD22 340 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 FBLIM1Q8WUP2 373 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 APOBEC4Q8WW27 367 aaKnown RBP18.49■□□□□ 0.55
HDAC1-201ENST00000373548 KLHL6Q8WZ60 621 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 KLK4Q9Y5K2 254 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 ENPP4Q9Y6X5 453 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 COMMD3-BMI1R4GMX3 469 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 ZNF217O75362 1048 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 NR2F6P10588 404 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 EPHA2P29317 976 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 CDH12P55289 794 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 KEAP1Q14145 624 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 CEBPEQ15744 281 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 ZNF773Q6PK81 442 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 PARGQ86W56 976 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 ZNF761Q86XN6 746 aaPredicted RBP18.49■□□□□ 0.55
HDAC1-201ENST00000373548 TTC29Q8NA56 475 aaPredicted RBP18.49■□□□□ 0.55
HDAC1-201ENST00000373548 GPR32P1Q8NGA4 272 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 GIPC3Q8TF64 312 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 ZNF681Q96N22 645 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 HRASLS2Q9NWW9 162 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 TRPC4Q9UBN4 977 aa18.49■□□□□ 0.55
HDAC1-201ENST00000373548 SLC28A2O43868 658 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 FESP07332 822 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 AGXTP21549 392 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms