RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 ASMTP46597 345 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 Q0VFX4 171 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 MYBPC3Q14896 1274 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 C6orf163Q5TEZ5 329 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 JMJD6Q6NYC1 403 aaPredicted RBP17.13■□□□□ 0.33
PBX3-202ENST00000373482 WDR75Q8IWA0 830 aaKnown RBP17.13■□□□□ 0.33
PBX3-202ENST00000373482 LRRC34Q8IZ02 419 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 SAMD14Q8IZD0 417 aaPredicted RBP17.13■□□□□ 0.33
PBX3-202ENST00000373482 FDCSPQ8NFU4 85 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 OR14A16Q8NHC5 309 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 GIMAP4Q9NUV9 329 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 NOP53Q9NZM5 478 aaKnown RBP17.13■□□□□ 0.33
PBX3-202ENST00000373482 EHD3Q9NZN3 535 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 HEY2Q9UBP5 337 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 UTS2RQ9UKP6 389 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 CES1P1Q9UKY3 287 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 EIF3LQ9Y262 564 aaKnown RBP17.13■□□□□ 0.33
PBX3-202ENST00000373482 PCDHGA9Q9Y5G4 932 aaKnown RBP17.13■□□□□ 0.33
PBX3-202ENST00000373482 ITPR1Q14643 2758 aa17.13■□□□□ 0.33
PBX3-202ENST00000373482 WASHC1A8K0Z3 465 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 C17orf105B2RV13 164 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 ALPPP05187 535 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 SLC35E2P0CK97 266 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 PRPS2P11908 318 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 PORP16435 677 aaPredicted RBP17.12■□□□□ 0.33
PBX3-202ENST00000373482 SDC1P18827 310 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 DDCP20711 480 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 XKP51811 444 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 RAPSNQ13702 412 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 FAM71E1Q6IPT2 247 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 RGS9BPQ6ZS82 235 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 MMP21Q8N119 569 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 LIX1Q8N485 282 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 MORN4Q8NDC4 146 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 B3GNT7Q8NFL0 401 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 ART5Q96L15 291 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 TSSK3Q96PN8 268 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 C1orf50Q9BV19 199 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 AKTIPQ9H8T0 292 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 KCNK13Q9HB14 408 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 MMP25Q9NPA2 562 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 SLCO1B3Q9NPD5 702 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 C5AR2Q9P296 337 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 ENTPD4Q9Y227 616 aa17.12■□□□□ 0.33
PBX3-202ENST00000373482 ATMQ13315 3056 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 ITGAMP11215 1152 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 BCKDHAP12694 445 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 CPMP14384 443 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 DDX5P17844 614 aaKnown RBP17.11■□□□□ 0.33
PBX3-202ENST00000373482 LBPP18428 481 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 CSNK2A2P19784 350 aaPredicted RBP17.11■□□□□ 0.33
PBX3-202ENST00000373482 TACR1P25103 407 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 GALNSP34059 522 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 CLCN2P51788 898 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 PGDP52209 483 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 ERVK-8P63133 956 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 EMX2Q04743 252 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 AGAP7PQ5VUJ5 663 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 IL23RQ5VWK5 629 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 NFAM1Q8NET5 270 aaPredicted RBP17.11■□□□□ 0.33
PBX3-202ENST00000373482 C9orf43Q8TAL5 461 aaPredicted RBP17.11■□□□□ 0.33
PBX3-202ENST00000373482 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.11■□□□□ 0.33
PBX3-202ENST00000373482 PTPMT1Q8WUK0 201 aaPredicted RBP17.11■□□□□ 0.33
PBX3-202ENST00000373482 EXOSC8Q96B26 276 aaKnown RBP17.11■□□□□ 0.33
PBX3-202ENST00000373482 VMP1Q96GC9 406 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 ABHD17AQ96GS6 310 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 EGLN2Q96KS0 407 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 AGAP4Q96P64 663 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 NUDT9Q9BW91 350 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 BAIAP2L1Q9UHR4 511 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 PCDHGB7Q9Y5F8 929 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 NBEAQ8NFP9 2946 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 EML6Q6ZMW3 1958 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 EXPH5Q8NEV8 1989 aa17.11■□□□□ 0.33
PBX3-202ENST00000373482 CNTRLQ7Z7A1 2325 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 SDHDO14521 159 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 ATXN7O15265 892 aaPredicted RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 CELA2AP08217 269 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 RPL3P39023 403 aaKnown RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 FEN1P39748 380 aaKnown RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 VWA5B1Q5TIE3 1220 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 TCTN3Q6NUS6 607 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 FAM47EQ6ZV65 393 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 FAM9CQ8IZT9 166 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 LRRC25Q8N386 305 aaPredicted RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 LSM14AQ8ND56 463 aaKnown RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 BRIX1Q8TDN6 353 aaKnown RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 RIT1Q92963 219 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 NCLNQ969V3 563 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 PPWD1Q96BP3 646 aaKnown RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 CNRIP1Q96F85 164 aaPredicted RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 OR8D2Q9GZM6 311 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 ZNF552Q9H707 407 aaPredicted RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 SLC35C2Q9NQQ7 365 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 ASIC5Q9NY37 505 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 COPS7AQ9UBW8 275 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 TEKT2Q9UIF3 430 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 PPIEQ9UNP9 301 aaKnown RBP17.1■□□□□ 0.33
PBX3-202ENST00000373482 ZNF451Q9Y4E5 1061 aa17.1■□□□□ 0.33
PBX3-202ENST00000373482 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms