RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 WBP11Q9Y2W2 641 aaKnown RBP12.1□□□□□ -0.47
CTPS1-202ENST00000372621 RBMX2Q9Y388 322 aaKnown RBP12.1□□□□□ -0.47
CTPS1-202ENST00000372621 SLC35F4A4IF30 521 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 PDZK1P1A8MUH7 402 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 HEPACAM2A8MVW5 462 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 C5orf58C9J3I9 102 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 KPNA3O00505 521 aaPredicted RBP12.1□□□□□ -0.47
CTPS1-202ENST00000372621 MMP20O60882 483 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 ERGP11308 486 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 WEE1P30291 646 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 OCLNQ16625 522 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 LRRC26Q2I0M4 334 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 TMC5Q6UXY8 1006 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 KRT78Q8N1N4 520 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 NATD1Q8N6N6 113 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 GALNT6Q8NCL4 622 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 RAB8BQ92930 207 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 NUS1Q96E22 293 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 MND1Q9BWT6 205 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 SERHL2Q9H4I8 314 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 NEUROD4Q9HD90 331 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 AHSPQ9NZD4 102 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 SEC14L4Q9UDX3 406 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 PLAGL1Q9UM63 463 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 GPR34Q9UPC5 381 aa12.1□□□□□ -0.47
CTPS1-202ENST00000372621 COL4A3Q01955 1670 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 PRAMEF27A3QJZ7 478 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ANKDD1BA6NHY2 528 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF670-ZNF695F2Z2N8 137 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 RTCAO00442 366 aaKnown RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 H1F0P07305 194 aaKnown RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 XKP51811 444 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 MAPK12P53778 367 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 MANFP55145 182 aaKnown RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF91Q05481 1191 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 SF3B4Q15427 424 aaKnown RBP eCLIP12.09□□□□□ -0.471e-10■■□□□ 12.3
CTPS1-202ENST00000372621 C6orf120Q7Z4R8 191 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 KRT73Q86Y46 540 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 PROKR2Q8NFJ6 384 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 OR8J1Q8NGP2 316 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 OR5AR1Q8NGP9 310 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 VANGL1Q8TAA9 524 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 SETD6Q8TBK2 473 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 SLC7A13Q8TCU3 470 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 FGF11Q92914 225 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF514Q96K75 400 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 CAPNS2Q96L46 248 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 WDFY2Q96P53 400 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 MS4A8Q9BY19 250 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 MOV10Q9HCE1 1003 aaKnown RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 STUB1Q9UNE7 303 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 RPL36Q9Y3U8 105 aaKnown RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 PDPK1O15530 556 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 OR10H3O60404 316 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 TPST2O60704 377 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 PDE9AO76083 593 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 MYCP01106 439 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 APOA1P02647 267 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 GPR1P46091 355 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 PCYT1AP49585 367 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 NKX2-5P52952 324 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 DPTQ07507 201 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 RAET1GQ6H3X3 334 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 BCDIN3DQ7Z5W3 292 aaKnown RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 COMTD1Q86VU5 262 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 SLC34A3Q8N130 599 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 C2orf73Q8N5S3 287 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ST13P5Q8NFI4 369 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 F2RL3Q96RI0 385 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 NRTNQ99748 197 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 MUTYHQ9UIF7 546 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 A4GNTQ9UNA3 340 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 DENND4AQ7Z401 1863 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 HYKKA2RU49 373 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ANHXE9PGG2 379 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 UGT2B17O75795 530 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 NR4A2P43354 598 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF79Q15937 498 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 SLC25A30Q5SVS4 291 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 CACTIN-AS1Q8N1I8 211 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 RAD51AP1Q96B01 352 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 OTUB2Q96DC9 234 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF486Q96H40 463 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF764Q96H86 408 aaPredicted RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 CEP19Q96LK0 163 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 ZSWIM3Q96MP5 696 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 POLR2J3Q9H1A7 115 aaKnown RBP12.09□□□□□ -0.47
CTPS1-202ENST00000372621 MVB12BQ9H7P6 319 aa12.09□□□□□ -0.47
CTPS1-202ENST00000372621 CAPN5O15484 640 aaPredicted RBP12.08□□□□□ -0.48
CTPS1-202ENST00000372621 FGF19O95750 216 aa12.08□□□□□ -0.48
CTPS1-202ENST00000372621 RHOP08100 348 aa12.08□□□□□ -0.48
CTPS1-202ENST00000372621 C6P13671 934 aa12.08□□□□□ -0.48
CTPS1-202ENST00000372621 PSMA1P25786 263 aaKnown RBP12.08□□□□□ -0.48
CTPS1-202ENST00000372621 RCVRNP35243 200 aa12.08□□□□□ -0.48
CTPS1-202ENST00000372621 HTR3AP46098 478 aa12.08□□□□□ -0.48
CTPS1-202ENST00000372621 RORCP51449 518 aa12.08□□□□□ -0.48
CTPS1-202ENST00000372621 PSPHP78330 225 aa12.08□□□□□ -0.48
CTPS1-202ENST00000372621 EFNB1P98172 346 aa12.08□□□□□ -0.48
CTPS1-202ENST00000372621 ALDH6A1Q02252 535 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms