RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CNRIP1Q96F85 164 aaPredicted RBP23.62■■□□□ 1.37
CTSA-203ENST00000372459 SMIM10Q96HG1 83 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 SLC35G5Q96KT7 338 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 SERINC2Q96SA4 455 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 PSME2Q9UL46 239 aa23.62■■□□□ 1.37
CTSA-203ENST00000372459 SAMHD1Q9Y3Z3 626 aaKnown RBP23.62■■□□□ 1.37
CTSA-203ENST00000372459 CSNK2A2P19784 350 aaPredicted RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 ZNF10P21506 573 aaPredicted RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 RPL6Q02878 288 aaKnown RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 ARMC6Q6NXE6 501 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 ABHD13Q7L211 337 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 SZRD1Q7Z422 152 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 ZNF761Q86XN6 746 aaPredicted RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 ZNF786Q8N393 782 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 RUBCNLQ9H714 662 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 ZCCHC3Q9NUD5 404 aaKnown RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 SEC24DO94855 1032 aaPredicted RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 BCHEP06276 602 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 NR2F6P10588 404 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 PVRP15151 417 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 NME1P15531 152 aaKnown RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 CDH2P19022 906 aaPredicted RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 BUD31P41223 144 aaPredicted RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 RAD23AP54725 363 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 FRMPD2BQ6IN97 320 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 BHLHB9Q6PI77 547 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 CEP68Q76N32 757 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 DGLUCYQ7Z3D6 616 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 CCDC116Q8IYX3 515 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 CAMKK1Q8N5S9 505 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 ZNF655Q8N720 491 aaPredicted RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 SUN3Q8TAQ9 357 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 ZCCHC10Q8TBK6 192 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 SFXN5Q8TD22 340 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 SLC38A5Q8WUX1 472 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 RSC1A1Q92681 617 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 FAM118AQ9NWS6 357 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 TUBA8Q9NY65 449 aaPredicted RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 PHF11Q9UIL8 331 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 RAB23Q9ULC3 237 aa23.61■■□□□ 1.37
CTSA-203ENST00000372459 TDRD6O60522 2096 aaKnown RBP23.61■■□□□ 1.37
CTSA-203ENST00000372459 LOC105369274A0A096LPK9 316 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 LOC102723532A0A0G2JNH3 316 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 TLR4O00206 839 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 HMGN4O00479 90 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 BMP10O95393 424 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 MAOBP27338 520 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 MPIP34949 423 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 ANKRD34AQ69YU3 496 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 RNF44Q7L0R7 432 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 GKN2Q86XP6 184 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 ARMC8Q8IUR7 673 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 OR4N4Q8N0Y3 316 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 AVL9Q8NBF6 648 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 MOAP1Q96BY2 351 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 MBOAT4Q96T53 435 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 ZNF780BQ9Y6R6 833 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 TRIOO75962 3097 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 ANKRD33BA6NCL7 494 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 TMEM247A6NEH6 219 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 H0YGG7 62 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 STK25O00506 426 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 ZSCAN9O15535 394 aaPredicted RBP23.6■■□□□ 1.37
CTSA-203ENST00000372459 TFPTP0C1Z6 253 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 MAGEA8P43361 318 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 ARF3P61204 181 aaPredicted RBP23.6■■□□□ 1.37
CTSA-203ENST00000372459 CEBPEQ15744 281 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 GEMIN6Q8WXD5 167 aaKnown RBP23.6■■□□□ 1.37
CTSA-203ENST00000372459 TMEM19Q96HH6 336 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 MUS81Q96NY9 551 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 ZNF347Q96SE7 839 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 EPYCQ99645 322 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 MIR1-1HGQ9H1L0 117 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 TBC1D17Q9HA65 648 aa23.6■■□□□ 1.37
CTSA-203ENST00000372459 TMEFF2Q9UIK5 374 aaPredicted RBP23.6■■□□□ 1.37
CTSA-203ENST00000372459 TRIM64CA6NLI5 447 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 B3GALT2O43825 422 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 C8orf89P0DMQ9 161 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 ITGA2P17301 1181 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 FEN1P39748 380 aaKnown RBP23.59■■□□□ 1.37
CTSA-203ENST00000372459 RGS19P49795 217 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 TNFRSF17Q02223 184 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 ZNF750Q32MQ0 723 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 DEFB134Q4QY38 66 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 MANEAQ5SRI9 462 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 RAB8BQ92930 207 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 ETAA1Q9NY74 926 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 NDUFAF4Q9P032 175 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 PDP1Q9P0J1 537 aaPredicted RBP23.59■■□□□ 1.37
CTSA-203ENST00000372459 DOLKQ9UPQ8 538 aa23.59■■□□□ 1.37
CTSA-203ENST00000372459 PRAMEF10O60809 474 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 PDE9AO76083 593 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 C9P02748 559 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 TYRP1P17643 537 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 CPN2P22792 545 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 IGFBP5P24593 272 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 ANXA11P50995 505 aaKnown RBP23.58■■□□□ 1.37
CTSA-203ENST00000372459 KCNAB2Q13303 367 aa23.58■■□□□ 1.37
CTSA-203ENST00000372459 ZC3H12BQ5HYM0 836 aaKnown RBP23.58■■□□□ 1.37
CTSA-203ENST00000372459 SLC44A2Q8IWA5 706 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms