RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 ZNF717Q9BY31 904 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-202ENST00000372237 POLR2J3Q9H1A7 115 aaKnown RBP18.17■□□□□ 0.5
TMEM53-202ENST00000372237 C14orf119Q9NWQ9 140 aa18.17■□□□□ 0.5
TMEM53-202ENST00000372237 NDOR1Q9UHB4 597 aa18.17■□□□□ 0.5
TMEM53-202ENST00000372237 CLEC2DQ9UHP7 191 aa18.17■□□□□ 0.5
TMEM53-202ENST00000372237 A8MU76 341 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 HIDE1A8MVS5 230 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 FAAHO00519 579 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 PSMA1P25786 263 aaKnown RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 DHCR24Q15392 516 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 SPHARQ15513 63 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 RBM45Q8IUH3 476 aaKnown RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 NATD1Q8N6N6 113 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 FLCNQ8NFG4 579 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 ZNF354BQ96LW1 612 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 TEFMQ96QE5 360 aaKnown RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 SDHCQ99643 169 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 CCDC32Q9BV29 185 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 OR52A5Q9H2C5 316 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 DYRK4Q9NR20 520 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 SEC14L3Q9UDX4 400 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 LSM2Q9Y333 95 aaKnown RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 ANHXE9PGG2 379 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 HMGN4O00479 90 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 CAPN5O15484 640 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 DYRK3O43781 588 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 SEMA3DO95025 777 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 TNFSF8P32971 234 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 TIE1P35590 1138 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 BSGP35613 385 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 RPS19P39019 145 aaKnown RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 NTHL1P78549 312 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 TARDBPQ13148 414 aaKnown RBP eCLIP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 NCF4Q15080 339 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 ZNF765Q7L2R6 523 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 TRIM69Q86WT6 500 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 ANKRD53Q8N9V6 530 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 EXOSC8Q96B26 276 aaKnown RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 ARRDC3Q96B67 414 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 ZNF607Q96SK3 696 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 AIF1LQ9BQI0 150 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 MS4A8Q9BY19 250 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 C3orf14Q9HBI5 128 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 SMURF1Q9HCE7 757 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 CXXC1Q9P0U4 656 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 KLHL3Q9UH77 587 aa18.16■□□□□ 0.5
TMEM53-202ENST00000372237 RPL36Q9Y3U8 105 aaKnown RBP18.16■□□□□ 0.5
TMEM53-202ENST00000372237 EIF2S1P05198 315 aaKnown RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 RB1P06400 928 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 CISD3P0C7P0 127 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 ITGB7P26010 798 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 CASP3P42574 277 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 KCNJ5P48544 419 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 VASPP50552 380 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 ERVFC1P60507 584 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 TMEM201Q5SNT2 666 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 DCUN1D3Q8IWE4 304 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 CACTIN-AS1Q8N1I8 211 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 CELF2-AS1Q8N7Q2 184 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 TCEANCQ8N8B7 351 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 ST13P5Q8NFI4 369 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 OR8J1Q8NGP2 316 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 RASSF5Q8WWW0 418 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 SMPDL3AQ92484 453 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 NRTNQ99748 197 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 MND1Q9BWT6 205 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 RHBGQ9H310 441 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 B4GALT2O60909 372 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 OPRD1P41143 372 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 BCL2A1Q16548 175 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 PLPP4Q5VZY2 271 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 C12orf73Q69YU5 71 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 PGBD2Q6P3X8 592 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 GDPGP1Q6ZNW5 385 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 SPATC1Q76KD6 591 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 SZRD1Q7Z422 152 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 WDR53Q7Z5U6 358 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 BCDIN3DQ7Z5W3 292 aaKnown RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 C11orf96Q7Z7L8 435 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 PDZD3Q86UT5 571 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 C12orf40Q86WS4 652 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 OR8H2Q8N162 312 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 OR4D11Q8NGI4 311 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 TFGQ92734 400 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 POLR2J2Q9GZM3 115 aaKnown RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 SIRT3Q9NTG7 399 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 CUEDC1Q9NWM3 386 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 WBP11Q9Y2W2 641 aaKnown RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 TMEM98Q9Y2Y6 226 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 PCYT1BQ9Y5K3 369 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-202ENST00000372237 SNX11Q9Y5W9 270 aa18.15■□□□□ 0.5
TMEM53-202ENST00000372237 SLC28A2O43868 658 aa18.14■□□□□ 0.49
TMEM53-202ENST00000372237 VEGFDO43915 354 aa18.14■□□□□ 0.49
TMEM53-202ENST00000372237 FGBP02675 491 aa18.14■□□□□ 0.49
TMEM53-202ENST00000372237 CXCR2P25025 360 aa18.14■□□□□ 0.49
TMEM53-202ENST00000372237 PCBP4P57723 403 aaKnown RBP18.14■□□□□ 0.49
TMEM53-202ENST00000372237 ZNF91Q05481 1191 aa18.14■□□□□ 0.49
TMEM53-202ENST00000372237 DPTQ07507 201 aa18.14■□□□□ 0.49
TMEM53-202ENST00000372237 CELF5Q8N6W0 485 aaKnown RBP18.14■□□□□ 0.49
TMEM53-202ENST00000372237 SLC7A13Q8TCU3 470 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms