RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PRMT2P55345 433 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 GFRA1P56159 465 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ABATP80404 500 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 LIPEQ05469 1076 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 MICBQ29980 383 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 LGALSLQ3ZCW2 172 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 VASNQ6EMK4 673 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ELP2Q6IA86 826 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ANGPTL8Q6UXH0 198 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 HSD17B13Q7Z5P4 300 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ADGRD2Q7Z7M1 963 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 PAQR7Q86WK9 346 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 CCDC117Q8IWD4 279 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 CNTN4Q8IWV2 1026 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 DMRTC2Q8IXT2 367 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ZBTB34Q8NCN2 500 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 DMBX1Q8NFW5 382 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 OR2T4Q8NH00 348 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 C1orf159Q96HA4 380 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 FICDQ9BVA6 458 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 CD244Q9BZW8 370 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 RHOJQ9H4E5 214 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 FBXO44Q9H4M3 255 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 TFB2MQ9H5Q4 396 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 RBFOX1Q9NWB1 397 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 THUMPD1Q9NXG2 353 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 SPHK1Q9NYA1 384 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 TMEFF2Q9UIK5 374 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 SLC39A10Q9ULF5 831 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 NDRG4Q9ULP0 352 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 PRG3Q9Y2Y8 225 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 TDRD15B5MCY1 1934 aaKnown RBP8.44□□□□□ -1.06
ATG4A-203ENST00000372232 A0A0J9YYE9 177 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 TARM1B6A8C7 271 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 NR5A2O00482 541 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 SCAMP1O15126 338 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 KIAA0513O60268 411 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 HLA-DQB1P01920 261 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 CD63P08962 238 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 ARSAP15289 507 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 OGNP20774 298 aaKnown RBP8.44□□□□□ -1.06
ATG4A-203ENST00000372232 CAPN3P20807 821 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 KCNQ1P51787 676 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 PRKG2Q13237 762 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 FAM98BQ52LJ0 330 aaKnown RBP8.44□□□□□ -1.06
ATG4A-203ENST00000372232 ANKRD34AQ69YU3 496 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 ESRP1Q6NXG1 681 aaKnown RBP8.44□□□□□ -1.06
ATG4A-203ENST00000372232 MSANTD2Q6P1R3 559 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 SHFQ7M4L6 423 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 ASPGQ86U10 573 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 SLC9B2Q86UD5 537 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 ZNF683Q8IZ20 524 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 CAMKVQ8NCB2 501 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 WDR36Q8NI36 951 aaKnown RBP8.44□□□□□ -1.06
ATG4A-203ENST00000372232 STYXQ8WUJ0 223 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 HGDQ93099 445 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 KIAA1143Q96AT1 154 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-203ENST00000372232 UPRTQ96BW1 309 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 CMTM3Q96MX0 182 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 FOLH1BQ9HBA9 442 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 ZDHHC4Q9NPG8 344 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 SLAMF7Q9NQ25 335 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 IMPAD1Q9NX62 359 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 MYEF2Q9P2K5 600 aaKnown RBP8.44□□□□□ -1.06
ATG4A-203ENST00000372232 EMC9Q9Y3B6 208 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 AP1M2Q9Y6Q5 423 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 V9GYQ6 96 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 NLRC5Q86WI3 1866 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 PTPRDP23468 1912 aa8.44□□□□□ -1.06
ATG4A-203ENST00000372232 PRKRAO75569 313 aaKnown RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 RECQL5O94762 991 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 PEX11BO96011 259 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 SPI1P17947 270 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 RORAP35398 523 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 RFC3P40938 356 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 VEGFCP49767 419 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 RAC1P63000 192 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 CHRNB3Q05901 458 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 STX4Q12846 297 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 CHAF1BQ13112 559 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 KCNAB1Q14722 419 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 VEPH1Q14D04 833 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 MPEG1Q2M385 716 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 WSCD2Q2TBF2 565 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 LCN1P1Q5VSP4 162 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 MZT2BQ6NZ67 158 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 BHLHB9Q6PI77 547 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 ABI3BPQ7Z7G0 1075 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 IFNEQ86WN2 208 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 LAX1Q8IWV1 398 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 ABI1Q8IZP0 508 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 HS3ST5Q8IZT8 346 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 UMODL1-AS1Q8N2C9 162 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 EXOSC8Q96B26 276 aaKnown RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 CHCHD6Q9BRQ6 235 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM175Q9BSA9 504 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 FSD1LQ9BXM9 530 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 DNTTIP1Q9H147 329 aa8.43□□□□□ -1.06
ATG4A-203ENST00000372232 ALX4Q9H161 411 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-203ENST00000372232 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms