RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 NLNQ9BYT8 704 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 OSGEPL1Q9H4B0 414 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 SOX17Q9H6I2 414 aaPredicted RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 SAMHD1Q9Y3Z3 626 aaKnown RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 URB1O60287 2271 aaKnown RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 ADAMTS20P59510 1910 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 A0A087WV48 116 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 H3BSA7 217 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 BCKDKO14874 412 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 PDPK1O15530 556 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 JRKO75564 520 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 RFPL3O75679 317 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 NTRK1P04629 796 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 CDK4P11802 303 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 EFNA1P20827 205 aaPredicted RBP13.35□□□□□ -0.27
LDB3-204ENST00000372066 CRHBPP24387 322 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 BSGP35613 385 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 FRKP42685 505 aaPredicted RBP13.35□□□□□ -0.27
LDB3-204ENST00000372066 PRIM2P49643 509 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 KCNJ10P78508 379 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 MC1RQ01726 317 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 BNIP3Q12983 259 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 SCARB2Q14108 478 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 MLC1Q15049 377 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 MPEG1Q2M385 716 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 IFI44LQ53G44 452 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 CRB2Q5IJ48 1285 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 C6orf141Q5SZD1 244 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 ANGPTL8Q6UXH0 198 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 ANKRD53Q8N9V6 530 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 CHDHQ8NE62 594 aaPredicted RBP13.35□□□□□ -0.27
LDB3-204ENST00000372066 C7orf34Q96L11 122 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 ACAT2Q9BWD1 397 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 EPS8L2Q9H6S3 715 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 TIMMDC1Q9NPL8 285 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 C1GALT1Q9NS00 363 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 THSD1Q9NS62 852 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 CUEDC1Q9NWM3 386 aaPredicted RBP13.35□□□□□ -0.27
LDB3-204ENST00000372066 VNN3Q9NY84 501 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 TAAR2Q9P1P5 351 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 ZNF451Q9Y4E5 1061 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 PCDHGB3Q9Y5G1 929 aa13.35□□□□□ -0.27
LDB3-204ENST00000372066 GOLGA4Q13439 2230 aaKnown RBP13.35□□□□□ -0.27
LDB3-204ENST00000372066 A8MVJ9 347 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 MYO1GB0I1T2 1018 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 C10orf142B7Z368 130 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 hCG_2039718K7EN88 272 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 MRPS14O60783 128 aaKnown RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 TRMUO75648 421 aaKnown RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 GBAP04062 536 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 ETFAP13804 333 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 NDUFS1P28331 727 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 EPHA8P29322 1005 aaPredicted RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 MAT2AP31153 395 aaKnown RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 GRK3P35626 688 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 NXPH1P58417 271 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 PPP2CBP62714 309 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 PPP2CAP67775 309 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 CSNK1G2P78368 415 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 CDK6Q00534 326 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 EEF1A2Q05639 463 aaKnown RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 IQCCQ4KMZ1 466 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 FAHD1Q6P587 224 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 KCTD8Q6ZWB6 473 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 VTCN1Q7Z7D3 282 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 HS3ST5Q8IZT8 346 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 LINC01555Q8NAE3 123 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 CIDECQ96AQ7 238 aaPredicted RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 TM4SF18Q96CE8 201 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 NEURL3Q96EH8 262 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 APOL4Q9BPW4 351 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 SARGQ9BW04 601 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 SLC6A16Q9GZN6 736 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 DDX31Q9H8H2 851 aaKnown RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 ERVMER34-1Q9H9K5 563 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 POLR1BQ9H9Y6 1135 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 ACSS1Q9NUB1 689 aaPredicted RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 TMEM184CQ9NVA4 438 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 GPATCH2Q9NW75 528 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 THUMPD1Q9NXG2 353 aaKnown RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 TAS2R7Q9NYW3 318 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 EHD3Q9NZN3 535 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 KIF17Q9P2E2 1029 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 PCDHGA8Q9Y5G5 932 aa13.34□□□□□ -0.27
LDB3-204ENST00000372066 CFAP20Q9Y6A4 193 aaKnown RBP13.34□□□□□ -0.27
LDB3-204ENST00000372066 LATO43561 262 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 NOL3O60936 208 aaKnown RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 TBX6O95947 436 aaPredicted RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 NUDT7P0C024 238 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 DRD2P14416 443 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 EEF1B2P24534 225 aaKnown RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 RPL10P27635 214 aaKnown RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 DCKP27707 260 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 ELK4P28324 431 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 SOAT1P35610 550 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 AHRP35869 848 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 PIGAP37287 484 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 CRYBA2P53672 197 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 DSTNP60981 165 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 CXCR4P61073 352 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms