RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 LSMEM2Q8N112 164 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 GPR150Q8NGU9 434 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 SCGB3A2Q96PL1 93 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 TSNAXQ99598 290 aaKnown RBP15.25■□□□□ 0.03
COL17A1-202ENST00000369733 C17orf62Q9BQA9 187 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 ACVR1BP36896 505 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 RGNQ15493 299 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 LRRC37A5PQ49AS3 106 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 CCDC120Q96HB5 630 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 WDR26Q9H7D7 661 aa15.25■□□□□ 0.03
COL17A1-202ENST00000369733 NMNAT1Q9HAN9 279 aaPredicted RBP15.25■□□□□ 0.03
COL17A1-202ENST00000369733 MRPL15Q9P015 296 aaKnown RBP15.25■□□□□ 0.03
COL17A1-202ENST00000369733 LAMA4Q16363 1823 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 CDKN1CP49918 316 aaPredicted RBP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 TMEM115Q12893 351 aaPredicted RBP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF792Q3KQV3 632 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 NHSL2Q5HYW2 709 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 PLAG1Q6DJT9 500 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 KDELC1Q6UW63 502 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 VITQ6UXI7 678 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 FTMTQ8N4E7 242 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 POGLUT1Q8NBL1 392 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 B3GNT7Q8NFL0 401 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 OR52N2Q8NGI0 321 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 GMPR2Q9P2T1 348 aaKnown RBP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 ENPP4Q9Y6X5 453 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 COL14A1Q05707 1796 aaKnown RBP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 TEX13CA0A0J9YWL9 993 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 RBBP9O75884 186 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 ARHGEF15O94989 841 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 PLATP00750 562 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 EDN1P05305 212 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 BMP4P12644 408 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 MAT2AP31153 395 aaKnown RBP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 ILF3Q12906 894 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 CNIH2Q6PI25 160 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 Q6ZVL8 140 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 NAGSQ8N159 534 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 CD200R1Q8TD46 325 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 CASTOR1Q8WTX7 329 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 TMEM185BQ9H7F4 350 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 UNC119BA6NIH7 251 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 GTF2F2P13984 249 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF8P17098 575 aaPredicted RBP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 GCGRP47871 477 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 ABCA11PQ4W5N1 156 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 AGAP7PQ5VUJ5 663 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 C6orf120Q7Z4R8 191 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 CLEC14AQ86T13 490 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 DCUN1D3Q8IWE4 304 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 GPR135Q8IZ08 494 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 IQCF1Q8N6M8 205 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 OR2AJ1Q8NGZ0 328 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 TSPAN6O43657 245 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 RBMXL2O75526 392 aaKnown RBP15.24■□□□□ 0.03
COL17A1-202ENST00000369733 GRK5P34947 590 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 SOX2P48431 317 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 SELENOWP63302 87 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 BCL7AQ4VC05 210 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 SHFQ7M4L6 423 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 RETREG3Q86VR2 466 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 HUS1BQ8NHY5 278 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 MOAP1Q96BY2 351 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 LAMB4A4D0S4 1761 aa15.24■□□□□ 0.03
COL17A1-202ENST00000369733 SLC31A1O15431 190 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 CREBL2O60519 120 aaPredicted RBP15.23■□□□□ 0.03
COL17A1-202ENST00000369733 IQCF3P0C7M6 154 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ALPPL2P10696 532 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SSTR4P31391 388 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 CASP3P42574 277 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SPRYD7Q5W111 196 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 METTL4Q8N3J2 472 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SLC44A3Q8N4M1 653 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SNAPC3Q92966 411 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 HSPA12BQ96MM6 686 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 COPZ2Q9P299 210 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 CLDN24A6NM45 220 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 M0R129 80 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 UBXN7O94888 489 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ARSAP15289 507 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 PYCR1P32322 319 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 DPY19L2P1Q6NXN4 242 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SLC22A15Q8IZD6 547 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 WFIKKN2Q8TEU8 576 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 OR10A4Q9H209 315 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 CHMP1AQ9HD42 196 aaPredicted RBP15.23■□□□□ 0.03
COL17A1-202ENST00000369733 CENPMQ9NSP4 180 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SLAMF8Q9P0V8 285 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ANHXE9PGG2 379 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 MEN1O00255 615 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 GPR32O75388 356 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 IFNA21P01568 189 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
COL17A1-202ENST00000369733 RGS6P49758 472 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 APOFQ13790 326 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SFRP4Q6FHJ7 346 aaPredicted RBP15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF783Q6ZMS7 281 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 CCDC116Q8IYX3 515 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF101Q8IZC7 436 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms