RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 GLTPQ9NZD2 209 aa16.59■□□□□ 0.25
CHTOP-203ENST00000368690 AFF4Q9UHB7 1163 aaKnown RBP16.59■□□□□ 0.25
CHTOP-203ENST00000368690 ELF5Q9UKW6 265 aaPredicted RBP16.59■□□□□ 0.25
CHTOP-203ENST00000368690 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.58■□□□□ 0.25
CHTOP-203ENST00000368690 MGAT4DA6NG13 374 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 UPK3BL1B0FP48 263 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 UPK3BL2E5RIL1 263 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 TEX28O15482 410 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 EFCAB14O75071 495 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 RAB36O95755 333 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 ARAFP10398 606 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 DDX5P17844 614 aaKnown RBP16.58■□□□□ 0.25
CHTOP-203ENST00000368690 SGSHP51688 502 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 TPBGQ13641 420 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 HEPACAMQ14CZ8 416 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 FAM214AQ32MH5 1076 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 USP30Q70CQ3 517 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 HDDC2Q7Z4H3 204 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 LAPTM4BQ86VI4 370 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 FAM26EQ8N5C1 309 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 UPRTQ96BW1 309 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 MCUBQ9NWR8 336 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 RAB23Q9ULC3 237 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 GSTK1Q9Y2Q3 226 aa16.58■□□□□ 0.25
CHTOP-203ENST00000368690 PLXNB3Q9ULL4 1909 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 TRBC2A0A5B9 178 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 RFPL3O75679 317 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 CLDN7O95471 211 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 ITPKAP23677 461 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 C3orf38Q5JPI3 329 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 QSOX2Q6ZRP7 698 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 TPGS1Q6ZTW0 290 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 RASGRP3Q8IV61 690 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 TMEM169Q96HH4 297 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 IGSF21Q96ID5 467 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 NT5DC2Q9H857 520 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 FOLH1BQ9HBA9 442 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 PTTG3PQ9NZH4 202 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 SLC23A1Q9UHI7 598 aa16.58■□□□□ 0.24
CHTOP-203ENST00000368690 PCM1Q15154 2024 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 IGLV3-16A0A075B6K0 115 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 IRGMA1A4Y4 181 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 C2orf78A6NCI8 922 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 CACNB4O00305 520 aaPredicted RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 SLC30A4O14863 429 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 RECKO95980 971 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 OR56A5P0C7T3 313 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 SYN1P17600 705 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 RPL17P18621 184 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 APEX1P27695 318 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 MAPK12P53778 367 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 SNRPD2P62316 118 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 HBA1P69905 142 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 ALDH6A1Q02252 535 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 GANABQ14697 944 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 PLEKHS1Q5SXH7 462 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 ATXN7L2Q5T6C5 722 aaPredicted RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 BICRALQ6AI39 1079 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 ANGPTL8Q6UXH0 198 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 ANKS3Q6ZW76 656 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 TMEM145Q8NBT3 493 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 ZNF558Q96NG5 402 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 SEPT5Q99719 369 aaPredicted RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 P2RY13Q9BPV8 354 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 RC3H2Q9HBD1 1191 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 TESQ9UGI8 421 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 SF3B6Q9Y3B4 125 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 CDH10Q9Y6N8 788 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 LTBP2Q14767 1821 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 H7C4K7 107 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 FAAHO00519 579 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 CDK2AP1O14519 115 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 SOCS5O75159 536 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 SLC22A5O76082 557 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 PDGFAP04085 211 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 HK1P19367 917 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 TIA1P31483 386 aaKnown RBP eCLIP16.57■□□□□ 0.241e-7■■□□□ 12.2
CHTOP-203ENST00000368690 HNF1BP35680 557 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 RPL3P39023 403 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 XKP51811 444 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 WNT4P56705 351 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 DUSP6Q16828 381 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 XKR6Q5GH73 641 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 ADGRF1Q5T601 910 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 CNIH2Q6PI25 160 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 CD200R1LQ6Q8B3 271 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 RSPO2Q6UXX9 243 aaPredicted RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 ZNF852Q6ZMS4 543 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 PDZD3Q86UT5 571 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 GRAMD2AQ8IUY3 354 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 KLHDC8AQ8IYD2 350 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 GPR65Q8IYL9 337 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 APOBEC4Q8WW27 367 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 MTERF1Q99551 399 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 PIGUQ9H490 435 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 REEP4Q9H6H4 257 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 MRPS18AQ9NVS2 196 aaKnown RBP16.57■□□□□ 0.24
CHTOP-203ENST00000368690 MAT2BQ9NZL9 334 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 NLKQ9UBE8 527 aa16.57■□□□□ 0.24
CHTOP-203ENST00000368690 MTMR11A4FU01 709 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms