RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 USP30Q70CQ3 517 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 VTCN1Q7Z7D3 282 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 GALNT12Q8IXK2 581 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 SHISA5Q8N114 240 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ANKRD53Q8N9V6 530 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 OR6Q1Q8NGQ2 317 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 HDAC2Q92769 488 aaKnown RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 UCN3Q969E3 161 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 RUBCNLQ9H714 662 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 SYNPO2LQ9H987 977 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 C12orf4Q9NQ89 552 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 RASSF1Q9NS23 344 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 MUTYHQ9UIF7 546 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 DUSP12Q9UNI6 340 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 NEUROG3Q9Y4Z2 214 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 FAM172BPA6NC97 362 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 M0QX08 132 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 CLIC1O00299 241 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 BTN3A3O00478 584 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 PRKRAO75569 313 aaKnown RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 PRPS2P11908 318 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ENGP17813 658 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ALOX12P18054 663 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 AKT2P31751 481 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 DMWDQ09019 674 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 HIST2H2ACQ16777 129 aaPredicted RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 UAP1L1Q3KQV9 507 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 OXR1Q8N573 874 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 AMER3Q8N944 861 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 OMA1Q96E52 524 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 BARD1Q99728 777 aaKnown RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 RHNO1Q9BSD3 238 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 SGPP1Q9BX95 441 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ASPSCR1Q9BZE9 553 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 C6orf62Q9GZU0 229 aaPredicted RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 ABCG4Q9H172 646 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ZNF624Q9P2J8 865 aaPredicted RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 ZNF221Q9UK13 617 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ICKQ9UPZ9 632 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 A0A096LPI6 279 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 A0A0X1KG70 313 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 A0A1W2PPV9 198 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 GSAPA4D1B5 854 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 B4DGG1 531 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 H3BUI4 141 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 PI15O43692 258 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 PCDH7O60245 1069 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 PRSS23O95084 383 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 EPN2O95208 641 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 ANGPTL1O95841 491 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 HPRP00739 348 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 C9P02748 559 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 LAMP1P11279 417 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 TYRP1P17643 537 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 MAPK9P45984 424 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 PPP1CAP62136 330 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 MTAPQ13126 283 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 SLC14A1Q13336 389 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 RAPSNQ13702 412 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 UNC5DQ6UXZ4 953 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 TAF8Q7Z7C8 310 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 HIPK1Q86Z02 1210 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 ESX1Q8N693 406 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 LCN9Q8WX39 176 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 NELL1Q92832 810 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 CXorf40BQ96DE9 158 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 CPPED1Q9BRF8 314 aaPredicted RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 MENTQ9BUN1 341 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 PAK1IP1Q9NWT1 392 aaPredicted RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 PDP1Q9P0J1 537 aaPredicted RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 ABCG2Q9UNQ0 655 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 MAU2Q9Y6X3 613 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 MDC1Q14676 2089 aaKnown RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 COL4A2P08572 1712 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 GLOD5A6NK44 160 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 SLC1A7O00341 560 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 CASC3O15234 703 aaKnown RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 PVRP15151 417 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 POLR2CP19387 275 aaPredicted RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 CBLP22681 906 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 PSMB9P28065 219 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 SLC19A1P41440 591 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 SNRPNP63162 240 aaKnown RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 RAE1P78406 368 aaKnown RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 CDKL4Q5MAI5 379 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 COMMD6Q7Z4G1 85 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 ZNF438Q7Z4V0 828 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 VN1R5Q7Z5H4 357 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 GLRX5Q86SX6 157 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 MINDY2Q8NBR6 621 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 OR5H6Q8NGV6 325 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 S100ZQ8WXG8 99 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 CIDECQ96AQ7 238 aaPredicted RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 CMTM7Q96FZ5 175 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 MAT2BQ9NZL9 334 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 SPASTQ9UBP0 616 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 ACSL5Q9ULC5 683 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 SAMHD1Q9Y3Z3 626 aaKnown RBP10.12□□□□□ -0.79
TPM3-212ENST00000368533 GMPPBQ9Y5P6 360 aa10.12□□□□□ -0.79
TPM3-212ENST00000368533 IGKV1-8A0A0C4DH67 115 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms