RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 HTR6P50406 440 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 SSR4P51571 173 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 PLIN5Q00G26 463 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 SLC18A2Q05940 514 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 LCP2Q13094 533 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 MAPKAPK3Q16644 382 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 SPRED3Q2MJR0 410 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 OR52E8Q6IFG1 317 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 MDGA2Q7Z553 956 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 SIAH3Q8IW03 269 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 SREK1Q8WXA9 508 aaKnown RBP17.58■□□□□ 0.4
CKS1B-203ENST00000368439 RBM18Q96H35 190 aaKnown RBP17.58■□□□□ 0.4
CKS1B-203ENST00000368439 RASL10BQ96S79 203 aa17.58■□□□□ 0.4
CKS1B-203ENST00000368439 CROCCQ5TZA2 2017 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 WWP2O00308 870 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 OR6B1O95007 311 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 UNC5CO95185 931 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CLPSP04118 112 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 MYL2P10916 166 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 HSD3B1P14060 373 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CHN1P15882 459 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 HSD3B2P26439 372 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 GALNSP34059 522 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CCT5P48643 541 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 PKNOX1P55347 436 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CCDC153Q494R4 210 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 C4orf17Q53FE4 359 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 RNFT1Q5M7Z0 435 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CCNYL2Q5T2Q4 361 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 NDUFAF5Q5TEU4 345 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 WDR93Q6P2C0 686 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 GFRALQ6UXV0 394 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 PAGE2Q7Z2X7 111 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 C9orf40Q8IXQ3 194 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CYP4Z2PQ8N1L4 340 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 TMEM156Q8N614 296 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CPSF7Q8N684 471 aaKnown RBP17.57■□□□□ 0.4
CKS1B-203ENST00000368439 DOK4Q8TEW6 326 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 AGAP11Q8TF27 550 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CCDC126Q96EE4 140 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 FBXL20Q96IG2 436 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 PELOQ9BRX2 385 aaKnown RBP17.57■□□□□ 0.4
CKS1B-203ENST00000368439 WDR41Q9HAD4 459 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 SEC14L3Q9UDX4 400 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 CES1P1Q9UKY3 287 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 GRID1Q9ULK0 1009 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 STK38LQ9Y2H1 464 aa17.57■□□□□ 0.4
CKS1B-203ENST00000368439 GTF3C1Q12789 2109 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 SLU7O95391 586 aaKnown RBP17.56■□□□□ 0.4
CKS1B-203ENST00000368439 ESRRBO95718 433 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 KRT6AP02538 564 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 KRT6BP04259 564 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 SLC35E2P0CK97 266 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 KRT4P19013 534 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 SOX3P41225 446 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 KRT6CP48668 564 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 DNAJB13P59910 316 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 CSTF3Q12996 717 aaKnown RBP17.56■□□□□ 0.4
CKS1B-203ENST00000368439 SULF2Q8IWU5 870 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 GPALPP1Q8IXQ4 340 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 C4orf33Q8N1A6 199 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 C1orf52Q8N6N3 182 aaKnown RBP17.56■□□□□ 0.4
CKS1B-203ENST00000368439 NUBPLQ8TB37 319 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 METTL6Q8TCB7 284 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 CHTF18Q8WVB6 975 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 TMEM125Q96AQ2 219 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 TM4SF18Q96CE8 201 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 GPR137Q96N19 417 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 KCNA7Q96RP8 456 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 VPS29Q9UBQ0 182 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 COPS7AQ9UBW8 275 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 PCDHA9Q9Y5H5 950 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 MYO7BQ6PIF6 2116 aa17.56■□□□□ 0.4
CKS1B-203ENST00000368439 ARHGAP10A1A4S6 786 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 SERTM1A2A2V5 107 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 COPEO14579 308 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 LRRTM2O43300 516 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 ULK1O75385 1050 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 NADKO95544 446 aaPredicted RBP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 ENO1P06733 434 aaKnown RBP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 GP1BBP13224 206 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 MAPK12P53778 367 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 FOXA1P55317 472 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 ERVK-8P63133 956 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 ALDH6A1Q02252 535 aaKnown RBP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 MPEG1Q2M385 716 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 IL20RBQ6UXL0 311 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 MMP21Q8N119 569 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 CCNYL1Q8N7R7 359 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 FAM98AQ8NCA5 519 aaKnown RBP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 OR5L2Q8NGL0 311 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 RDH11Q8TC12 318 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 ASB15Q8WXK1 588 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 RIT1Q92963 219 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 RELTQ969Z4 430 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 C11orf24Q96F05 449 aaPredicted RBP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 ART5Q96L15 291 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 ACPTQ9BZG2 426 aa17.55■□□□□ 0.4
CKS1B-203ENST00000368439 TSPAN10Q9H1Z9 355 aaPredicted RBP17.55■□□□□ 0.4
CKS1B-203ENST00000368439 DEPPQ9NTK1 212 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms