RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TNNI3P19429 210 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 TIA1P31483 386 aaKnown RBP eCLIP20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 FOXK1P85037 733 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 PLIN5Q00G26 463 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 ACSM2AQ08AH3 577 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 TUBA3CQ13748 450 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 INPP5JQ15735 1006 aaPredicted RBP20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 IGFBP7Q16270 282 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 ACSM2BQ68CK6 577 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 SLC48A1Q6P1K1 146 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 TUBA3EQ6PEY2 450 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 RNF165Q6ZSG1 346 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 OR1N1Q8NGS0 311 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 CPT1CQ8TCG5 803 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 THAP3Q8WTV1 239 aaPredicted RBP20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 SNRNP40Q96DI7 357 aaKnown RBP20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 RBM18Q96H35 190 aaKnown RBP20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 OR8D2Q9GZM6 311 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 HEY2Q9UBP5 337 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 NTNG1Q9Y2I2 539 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 FIS1Q9Y3D6 152 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 DNAJC15Q9Y5T4 150 aa20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 HELZ2Q9BYK8 2649 aaKnown RBP20.88■□□□□ 0.93
ECHDC1-203ENST00000368291 GABRR3A8MPY1 467 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 HRKO00198 91 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 GUCY1B2O75343 617 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 RSL1D1O76021 490 aaKnown RBP20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 IGKV3-11P04433 115 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 ZNF750Q32MQ0 723 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 SPDYAQ5MJ70 313 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 ZNF468Q5VIY5 522 aaPredicted RBP20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 Q6ZSR9 355 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 NUDCD3Q8IVD9 361 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 OR2T11Q8NH01 316 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 DOK4Q8TEW6 326 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 SENP5Q96HI0 755 aaPredicted RBP20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 KCNK9Q9NPC2 374 aa20.87■□□□□ 0.93
ECHDC1-203ENST00000368291 WDR91A4D1P6 747 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 NPIPB8E9PQR5 432 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 BIRC5O15392 142 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 ZWINTO95229 277 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 SLC35E2P0CK97 266 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 PRPH2P23942 346 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 PIK3R1P27986 724 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 SERPINB5P36952 375 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 CD96P40200 585 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 KIAA0040Q15053 153 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 IMPG1Q17R60 797 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 CISD2Q8N5K1 135 aaKnown RBP20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 OR4K14Q8NGD5 310 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 C16orf78Q8WTQ4 265 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 TLCD1Q96CP7 247 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 C19orf60Q96EN9 201 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 SIGLEC12Q96PQ1 595 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 EBPLQ9BY08 206 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 LIN28AQ9H9Z2 209 aaKnown RBP20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 EML4Q9HC35 981 aaKnown RBP20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 ANKRD10Q9NXR5 420 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 DLGAP4Q9Y2H0 992 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 TRAF6Q9Y4K3 522 aa20.86■□□□□ 0.93
ECHDC1-203ENST00000368291 TRAV17A0A0B4J275 112 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 ZFAND5O76080 213 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 IL3P08700 152 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 COX7A2P14406 83 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 GALNSP34059 522 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 SPRED3Q2MJR0 410 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 RPUSD3Q6P087 351 aaKnown RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 C16orf47Q6ZP98 133 aaPredicted RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 CLYBLQ8N0X4 340 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 MDS2Q8NDY4 140 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 SREK1Q8WXA9 508 aaKnown RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 PELOQ9BRX2 385 aaKnown RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 ABI3Q9P2A4 366 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 ZDHHC2Q9UIJ5 367 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 PRRC2CQ9Y520 2896 aaKnown RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 GNG14A0A1W2PPG7 69 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 SLC28A1O00337 649 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 ITM2AO43736 263 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 ANXA4P09525 319 aaPredicted RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 XKP51811 444 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 DUSP2Q05923 314 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 CHI3L2Q15782 390 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 SH2D4BQ5SQS7 431 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 HSDL2Q6YN16 418 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 ZNF227Q86WZ6 799 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 OR8K3Q8NH51 312 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 TWIST2Q8WVJ9 160 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 FBXL20Q96IG2 436 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 BARD1Q99728 777 aaKnown RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 UTP23Q9BRU9 249 aaKnown RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 FAIM2Q9BWQ8 316 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 ZNF395Q9H8N7 513 aaPredicted RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 TRIM45Q9H8W5 580 aaPredicted RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 CXorf21Q9HAI6 301 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 ASF1BQ9NVP2 202 aa20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 POLR3HQ9Y535 204 aaPredicted RBP20.85■□□□□ 0.93
ECHDC1-203ENST00000368291 GCN1Q92616 2671 aaKnown RBP20.84■□□□□ 0.93
ECHDC1-203ENST00000368291 OR10H2O60403 315 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms