RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 RNF167Q9H6Y7 350 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 SIRT3Q9NTG7 399 aaPredicted RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 TAS2R16Q9NYV7 291 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 P2RX2Q9UBL9 471 aa13.57□□□□□ -0.24
CD48-201ENST00000368045 DNMT3AQ9Y6K1 912 aaPredicted RBP13.57□□□□□ -0.24
CD48-201ENST00000368045 DOCK6Q96HP0 2047 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 HMGN4O00479 90 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 OR10H3O60404 316 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 SEPHS1P49903 392 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 XKP51811 444 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 METAP1P53582 386 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 SOWAHCQ53LP3 525 aaPredicted RBP13.56□□□□□ -0.24
CD48-201ENST00000368045 MFSD4BQ5TF39 518 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 PGBD2Q6P3X8 592 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 ETFBKMTQ8IXQ9 262 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 NLGN4XQ8N0W4 816 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 PROKR2Q8NFJ6 384 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 OR5K2Q8NHB8 316 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 SETD6Q8TBK2 473 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 HTRA1Q92743 480 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 F2RL3Q96RI0 385 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 POLR2J3Q9H1A7 115 aaKnown RBP13.56□□□□□ -0.24
CD48-201ENST00000368045 HHATLQ9HCP6 504 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 C11orf16Q9NQ32 467 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 SEMA3GQ9NS98 782 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 KLHL3Q9UH77 587 aa13.56□□□□□ -0.24
CD48-201ENST00000368045 A0A1W2PRQ8 180 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 NDUFS4O43181 175 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 GPX5O75715 221 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 KCNK2O95069 426 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 ADRA2AP08913 450 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 POU2F2P09086 479 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 DRD2P14416 443 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 FUT4P22083 530 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 COPZ1P61923 177 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 NTHL1P78549 312 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 SEC23BQ15437 767 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 SPHARQ15513 63 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 KIAA1211LQ6NV74 962 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 LRRTM4Q86VH4 590 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 ANKRD53Q8N9V6 530 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 OR9Q1Q8NGQ5 310 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 RAB7BQ96AH8 199 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 CEP19Q96LK0 163 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 SLC30A2Q9BRI3 323 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 SPATA5L1Q9BVQ7 753 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 QPCTLQ9NXS2 382 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 EHD3Q9NZN3 535 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 TAC3Q9UHF0 121 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 PLAGL1Q9UM63 463 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 HCFC2Q9Y5Z7 792 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 ANHXE9PGG2 379 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 SLC28A2O43868 658 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 UGT2B17O75795 530 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 CEBPBP17676 345 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 GTF2E2P29084 291 aaKnown RBP13.55□□□□□ -0.24
CD48-201ENST00000368045 PPP2R1BP30154 601 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 CCT3P49368 545 aaKnown RBP13.55□□□□□ -0.24
CD48-201ENST00000368045 ANXA11P50995 505 aaKnown RBP13.55□□□□□ -0.24
CD48-201ENST00000368045 TPTEP56180 551 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 RPS26P62854 115 aaKnown RBP13.55□□□□□ -0.24
CD48-201ENST00000368045 ZNF91Q05481 1191 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 HSPB3Q12988 150 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
CD48-201ENST00000368045 C12orf40Q86WS4 652 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 FAM26EQ8N5C1 309 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 BBS10Q8TAM1 723 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 NXPE3Q969Y0 559 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 IL4I1Q96RQ9 567 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 ACAT2Q9BWD1 397 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 POLDIP3Q9BY77 421 aaKnown RBP13.55□□□□□ -0.24
CD48-201ENST00000368045 DDX31Q9H8H2 851 aaKnown RBP13.55□□□□□ -0.24
CD48-201ENST00000368045 SMURF1Q9HCE7 757 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 PRDM8Q9NQV8 689 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 SACM1LQ9NTJ5 587 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 NPAP1Q9NZP6 1156 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 SEC14L3Q9UDX4 400 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 STUB1Q9UNE7 303 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 INSL6Q9Y581 213 aa13.55□□□□□ -0.24
CD48-201ENST00000368045 HTR3EA5X5Y0 456 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 H3BN98 237 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 RTCAO00442 366 aaKnown RBP13.54□□□□□ -0.24
CD48-201ENST00000368045 KMOO15229 486 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 ASNA1O43681 348 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 B4GALT2O60909 372 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 ACRP10323 421 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 PSMA1P25786 263 aaKnown RBP13.54□□□□□ -0.24
CD48-201ENST00000368045 ITGB8P26012 769 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 MLLT11Q13015 90 aaPredicted RBP13.54□□□□□ -0.24
CD48-201ENST00000368045 GNA13Q14344 377 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 LEXMQ3ZCV2 418 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 TCEAL5Q5H9L2 206 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 ATAD3BQ5T9A4 648 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 METRNLQ641Q3 311 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.54□□□□□ -0.24
CD48-201ENST00000368045 DEF8Q6ZN54 512 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 GRASPQ7Z6J2 395 aaPredicted RBP13.54□□□□□ -0.24
CD48-201ENST00000368045 SLC34A3Q8N130 599 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms