RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 HIST1H2ADP20671 130 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 ACSL1P33121 698 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 RPL3P39023 403 aaKnown RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 GDF5P43026 501 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 SLC15A1P46059 708 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 HTR3AP46098 478 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 HMGA2P52926 109 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 RHOAP61586 193 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 RPS24P62847 133 aaKnown RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 SELENOWP63302 87 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 SYT16Q17RD7 645 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 IFI44LQ53G44 452 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 ARMCX4Q5H9R4 360 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 PLEKHS1Q5SXH7 462 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 RSBN1Q5VWQ0 802 aaPredicted RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 SERPINA13PQ6UXR4 307 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 SLC44A2Q8IWA5 706 aaPredicted RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 STX19Q8N4C7 294 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 CLHC1Q8NHS4 586 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 WFIKKN2Q8TEU8 576 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 TP53INP1Q96A56 240 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 COQ8BQ96D53 544 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 EID2BQ96D98 161 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 C11orf24Q96F05 449 aaPredicted RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 HIST1H2AHQ96KK5 128 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 TRNT1Q96Q11 434 aaKnown RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 HIST1H2AJQ99878 128 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 SLC30A2Q9BRI3 323 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 H2AFJQ9BTM1 129 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 TMEM38AQ9H6F2 299 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 C6orf106Q9H6K1 298 aaPredicted RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 TPT1P8Q9HAU6 139 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 POLE4Q9NR33 117 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 TM7SF3Q9NS93 570 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 FBXL12Q9NXK8 326 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 EHD3Q9NZN3 535 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 NDOR1Q9UHB4 597 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 WBP11Q9Y2W2 641 aaKnown RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 GPSM3Q9Y4H4 160 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 PRSS21Q9Y6M0 314 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 ARID1BQ8NFD5 2236 aaPredicted RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 BPTFQ12830 3046 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 DOCK9Q9BZ29 2069 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 A0A1B0GVT2 93 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 HMX3A6NHT5 357 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 CACNB4O00305 520 aaPredicted RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 CCRL2O00421 344 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 RNASET2O00584 256 aaKnown RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 SCAMP2O15127 329 aaKnown RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 TSPAN3O60637 253 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 TRIM3O75382 744 aaPredicted RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 CCNKO75909 580 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 KRT75O95678 551 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 IFNA14P01570 189 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 OR56A5P0C7T3 313 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 ACADMP11310 421 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 COX7A2P14406 83 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 ALOX12P18054 663 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 CYP2A7P20853 494 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 CHMP24386 653 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 TACR1P25103 407 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 AOAHP28039 575 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 EPHA2P29317 976 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 RRM2P31350 389 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 HNF4AP41235 474 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 MAPK9P45984 424 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 CSNK1EP49674 416 aaKnown RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 ARHGEF7Q14155 803 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 E2F2Q14209 437 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 SF3B4Q15427 424 aaKnown RBP eCLIP10.97□□□□□ -0.651e-7■■■■□ 25.6
USF1-201ENST00000368019 CPSF6Q16630 551 aaKnown RBP eCLIP10.97□□□□□ -0.65
USF1-201ENST00000368019 MICAQ29983 383 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 SGO1Q5FBB7 561 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 MPP7Q5T2T1 576 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 TMPRSS7Q7RTY8 843 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 VTCN1Q7Z7D3 282 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 CCDC103Q8IW40 242 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 HJURPQ8NCD3 748 aaPredicted RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 FAM83FQ8NEG4 500 aaPredicted RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 SETD7Q8WTS6 366 aaKnown RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 CYB5D2Q8WUJ1 264 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 KIAA1143Q96AT1 154 aaPredicted RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 APIPQ96GX9 242 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 LMLNQ96KR4 655 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 APOLD1Q96LR9 279 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 ORAI3Q9BRQ5 295 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 RHNO1Q9BSD3 238 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 DUSP26Q9BV47 211 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 TAPBPLQ9BX59 468 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 TP63Q9H3D4 680 aaPredicted RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 SLA2Q9H6Q3 261 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 IL26Q9NPH9 171 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 PRSS16Q9NQE7 514 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 RASSF1Q9NS23 344 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 ARL15Q9NXU5 204 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 ZNF226Q9NYT6 803 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 SEC14L4Q9UDX3 406 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 PNMA8BQ9ULN7 279 aaPredicted RBP10.97□□□□□ -0.65
USF1-201ENST00000368019 VPS4AQ9UN37 437 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms