RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 LDB3O75112 727 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 ACTL6AO96019 429 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 IGKV3-11P04433 115 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 C8GP07360 202 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 SERPINB3P29508 390 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 CETN2P41208 172 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 RPL21P46778 160 aaKnown RBP13.3□□□□□ -0.28
VAMP4-202ENST00000367740 LIM2P55344 173 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 EEF1A1P68104 462 aaKnown RBP13.3□□□□□ -0.28
VAMP4-202ENST00000367740 STX4Q12846 297 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 SP140Q13342 867 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 CSHL1Q14406 222 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 TOMM20Q15388 145 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 EEF1A1P5Q5VTE0 462 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 VWA1Q6PCB0 445 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 SH2D5Q6ZV89 423 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 CAND1Q86VP6 1230 aaKnown RBP13.3□□□□□ -0.28
VAMP4-202ENST00000367740 FAM83FQ8NEG4 500 aaPredicted RBP13.3□□□□□ -0.28
VAMP4-202ENST00000367740 ATG4AQ8WYN0 398 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 UCN3Q969E3 161 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 STARD4Q96DR4 205 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 MS4A6EQ96DS6 147 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 ART5Q96L15 291 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 SYBUQ9NX95 663 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 IFNKQ9P0W0 207 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 LPAR3Q9UBY5 353 aa13.3□□□□□ -0.28
VAMP4-202ENST00000367740 A0A096LNT2 108 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 TCRBV7S2A1N4TA0A589 114 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 HRKO00198 91 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 KLF4O43474 513 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 IFNB1P01574 187 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 THBDP07204 575 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 POU2F1P14859 743 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 ETS1P14921 441 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 CERS1P27544 350 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 MSH2P43246 934 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 MTTPP55157 894 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 STXBP1P61764 594 aaKnown RBP13.29□□□□□ -0.28
VAMP4-202ENST00000367740 ID2Q02363 134 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 SRYQ05066 204 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 RBBP5Q15291 538 aaKnown RBP13.29□□□□□ -0.28
VAMP4-202ENST00000367740 BEX5Q5H9J7 111 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 DUPD1Q68J44 220 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 BHLHB9Q6PI77 547 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 KLHDC8AQ8IYD2 350 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 ATL1Q8WXF7 558 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 CAVIN3Q969G5 261 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 TRMT61AQ96FX7 289 aaKnown RBP13.29□□□□□ -0.28
VAMP4-202ENST00000367740 SENP5Q96HI0 755 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-202ENST00000367740 KCNK17Q96T54 332 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 OPN3Q9H1Y3 402 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-202ENST00000367740 EIF2B3Q9NR50 452 aaKnown RBP13.29□□□□□ -0.28
VAMP4-202ENST00000367740 FBXO6Q9NRD1 293 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-202ENST00000367740 FETUBQ9UGM5 382 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 DAPP1Q9UN19 280 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 DTX4Q9Y2E6 619 aa13.29□□□□□ -0.28
VAMP4-202ENST00000367740 BTNL10A8MVZ5 291 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 C16orf97H3BN30 126 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 TGM6O95932 706 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 IGHV4-39P01824 125 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 PTMAP06454 111 aaKnown RBP13.28□□□□□ -0.28
VAMP4-202ENST00000367740 THBS1P07996 1170 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 PAMP19021 973 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 MGAT1P26572 445 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 PTPN6P29350 595 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 CDKN1AP38936 164 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 MASP1P48740 699 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 SERTAD2Q14140 314 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.28
VAMP4-202ENST00000367740 OASLQ15646 514 aaKnown RBP13.28□□□□□ -0.28
VAMP4-202ENST00000367740 TMEM249Q2WGJ8 235 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 UBAP2Q5T6F2 1119 aaKnown RBP13.28□□□□□ -0.28
VAMP4-202ENST00000367740 ZNF470Q6ECI4 717 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.28□□□□□ -0.28
VAMP4-202ENST00000367740 TMPRSS11BQ86T26 416 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 YRDCQ86U90 279 aaKnown RBP13.28□□□□□ -0.28
VAMP4-202ENST00000367740 LUZP1Q86V48 1076 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 DENND6AQ8IWF6 608 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 EEF1AKMT1Q8WVE0 214 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 CTHRC1Q96CG8 243 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 GAL3ST4Q96RP7 486 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 AIF1LQ9BQI0 150 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 TMEM204Q9BSN7 226 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 CCDC68Q9H2F9 335 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 PELI2Q9HAT8 420 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 ELOVL5Q9NYP7 299 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 SOX13Q9UN79 622 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 MAPRE3Q9UPY8 281 aa13.28□□□□□ -0.28
VAMP4-202ENST00000367740 PRR14LQ5THK1 2151 aa13.27□□□□□ -0.28
VAMP4-202ENST00000367740 C2orf72A6NCS6 295 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 LRIT2A6NDA9 550 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 SNX4O95219 450 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 CHMP24386 653 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 CFPP27918 469 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 STIP1P31948 543 aaKnown RBP13.27□□□□□ -0.29
VAMP4-202ENST00000367740 MAGEA1P43355 309 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 NPY2RP49146 381 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 PLA2G16P53816 162 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 FBXW4P57775 412 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 RPS6KA2Q15349 733 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms