RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 AKAP1Q92667 903 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 TESCQ96BS2 214 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 HYLS1Q96M11 299 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 TM9SF2Q99805 663 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 DPCDQ9BVM2 203 aaPredicted RBP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 MND1Q9BWT6 205 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 INSL5Q9Y5Q6 135 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 KCNE2Q9Y6J6 123 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 PRUNE2Q8WUY3 3088 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 KCNE1BA0A087WTH5 132 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 OR10H3O60404 316 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 HOXD10P28358 340 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 EPHB3P54753 998 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 WNT3P56703 355 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 MC1RQ01726 317 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 GAB1Q13480 694 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 DOC2AQ14183 400 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 LRRC32Q14392 662 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 P2RY14Q15391 338 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 ATAT1Q5SQI0 421 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 ASTLQ6HA08 431 aaPredicted RBP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 FAM46DQ8NEK8 389 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 TOR1AIP2Q8NFQ8 470 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 NRTNQ99748 197 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 MRPL9Q9BYD2 267 aaKnown RBP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 RBFOX1Q9NWB1 397 aaKnown RBP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 B3GNT2Q9NY97 397 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 TVP23BQ9NYZ1 205 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 SZT2Q5T011 3432 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 TRAV6A0A075B6T7 132 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 NEDD8-MDP1E9PL57 170 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 HPGDSO60760 199 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 GASTP01350 101 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 PFN3P60673 137 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 RPA4Q13156 261 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 FRMPD2BQ6IN97 320 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 CCDC149Q6ZUS6 474 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 USP45Q70EL2 814 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 LAPTM4BQ86VI4 370 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 TMEM25Q86YD3 366 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 CELF5Q8N6W0 485 aaKnown RBP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 DNAJA4Q8WW22 397 aaPredicted RBP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 SCRN2Q96FV2 425 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 CMTM7Q96FZ5 175 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 ELAC1Q9H777 363 aaKnown RBP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 PAK6Q9NQU5 681 aaPredicted RBP18.7■□□□□ 0.58
TRIM58-201ENST00000366481 SNX11Q9Y5W9 270 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.69■□□□□ 0.58
TRIM58-201ENST00000366481 ATP6V1G2-DDX39BF2Z307 99 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 SLC22A5O76082 557 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 ABLIM3O94929 683 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 RAB14P61106 215 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 GLYR1Q49A26 553 aaPredicted RBP18.69■□□□□ 0.58
TRIM58-201ENST00000366481 GPR33Q49SQ1 333 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 COX20Q5RI15 118 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 DNAJC5GQ8N7S2 189 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 CSGALNACT1Q8TDX6 532 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 AP3S1Q92572 193 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 SLC25A46Q96AG3 418 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 REPS1Q96D71 796 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 SLC12A9Q9BXP2 914 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 CLEC4MQ9H2X3 399 aaPredicted RBP18.69■□□□□ 0.58
TRIM58-201ENST00000366481 MRPL17Q9NRX2 175 aaKnown RBP18.69■□□□□ 0.58
TRIM58-201ENST00000366481 GABRR3A8MPY1 467 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 PDHA2P29803 388 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 SSTR2P30874 369 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 CTSCP53634 463 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 VEZF1Q14119 521 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 RGNQ15493 299 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 KLHL12Q53G59 568 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 HSD11B1LQ7Z5J1 315 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 COMMD7Q86VX2 200 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 ZNF296Q8WUU4 475 aaPredicted RBP18.69■□□□□ 0.58
TRIM58-201ENST00000366481 UPRTQ96BW1 309 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 ZBED6CLQ96FA7 236 aaPredicted RBP18.69■□□□□ 0.58
TRIM58-201ENST00000366481 TSSK6Q9BXA6 273 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 IL21Q9HBE4 155 aa18.69■□□□□ 0.58
TRIM58-201ENST00000366481 CNOT2Q9NZN8 540 aaKnown RBP18.69■□□□□ 0.58
TRIM58-201ENST00000366481 LSM7Q9UK45 103 aaKnown RBP18.69■□□□□ 0.58
TRIM58-201ENST00000366481 SHOXO15266 292 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 ARHGEF15O94989 841 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 ATP1B2P14415 290 aaPredicted RBP18.68■□□□□ 0.58
TRIM58-201ENST00000366481 PRKACAP17612 351 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 AVPR1BP47901 424 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 CRYBA2P53672 197 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 TNK1Q13470 666 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 LAMTOR1Q6IAA8 161 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 OTOP2Q7RTS6 562 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 KRT74Q7RTS7 529 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 OR52P1PQ8NH57 321 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 GTPBP2Q9BX10 602 aaKnown RBP18.68■□□□□ 0.58
TRIM58-201ENST00000366481 SGK2Q9HBY8 427 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 VPS29Q9UBQ0 182 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 STOML2Q9UJZ1 356 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 EYSQ5T1H1 3165 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 HYKKA2RU49 373 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 SH3D21A4FU49 640 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 MPZL2O60487 215 aa18.68■□□□□ 0.58
TRIM58-201ENST00000366481 ANXA4P09525 319 aaPredicted RBP18.68■□□□□ 0.58
TRIM58-201ENST00000366481 GABRB1P18505 474 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms