RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SDR42E2A6NKP2 422 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 CCSO14618 274 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 CSDE1O75534 798 aaKnown RBP3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 GLCEO94923 617 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 SLC16A8O95907 504 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 EPOP01588 193 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 FCGR3AP08637 254 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 NUDT17P0C025 328 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 HSD17B1P14061 328 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 SERPINB6P35237 376 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 FRKP42685 505 aaPredicted RBP3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 RBP5P82980 135 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 ARHGAP1Q07960 439 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 CNPY1Q3B7I2 92 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 ANKRD55Q3KP44 614 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 C14orf28Q4W4Y0 310 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 ODF2Q5BJF6 829 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 LRRC38Q5VT99 294 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 ABRAXAS1Q6UWZ7 409 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 CCDC83Q8IWF9 413 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 ATAD1Q8NBU5 361 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 TBCKQ8TEA7 893 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 GGHQ92820 318 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 FAM46BQ96A09 425 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 NUS1Q96E22 293 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 RBM18Q96H35 190 aaKnown RBP3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 PANX3Q96QZ0 392 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 AGPAT1Q99943 283 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 DEFB126Q9BYW3 111 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 WWP1Q9H0M0 922 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 ADGRL4Q9HBW9 690 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 CDH7Q9ULB5 785 aa3.24□□□□□ -1.89
RNU4-28P-201ENST00000364739 KLF18A0A0U1RQI7 1052 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 CRCPO75575 148 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 CPNE6O95741 557 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 CHRNGP07510 517 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 GSTA2P09210 222 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 C8orf89P0DMQ9 161 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 PAX2Q02962 417 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 RFTN1Q14699 578 aaPredicted RBP3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 P2RY14Q15391 338 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 FAM219BQ5XKK7 198 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 ITIH5Q86UX2 942 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 LAX1Q8IWV1 398 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 PARP8Q8N3A8 854 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 GVQW1Q8N7I0 195 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 ICA1LQ8NDH6 482 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 OR7G3Q8NG95 312 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 GOT1L1Q8NHS2 421 aaPredicted RBP3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 ULK4Q96C45 1275 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 AP2M1Q96CW1 435 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 B3GALT6Q96L58 329 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 MLPHQ9BV36 600 aaPredicted RBP3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 UTP14AQ9BVJ6 771 aaKnown RBP3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 DPEP3Q9H4B8 488 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 RNF41Q9H4P4 317 aaPredicted RBP3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 ELL3Q9HB65 397 aaPredicted RBP3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 SLC25A19Q9HC21 320 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 GDF3Q9NR23 364 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 ZNF275Q9NSD4 429 aaPredicted RBP3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 TECRQ9NZ01 308 aaKnown RBP3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 SPG21Q9NZD8 308 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 CLEC4EQ9ULY5 219 aa3.23□□□□□ -1.89
RNU4-28P-201ENST00000364739 A0A0A6YYC8 382 aaPredicted RBP3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 A4D1N5 150 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 RNF212BA8MTL3 300 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 I3L1I5 382 aaPredicted RBP3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 TTI1O43156 1089 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 PPP2R1BP30154 601 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 DRD3P35462 400 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 MDH2P40926 338 aaKnown RBP3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 ST8SIA6P61647 398 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 GABPAQ06546 454 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 BFSP1Q12934 665 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 OR1C1Q15619 314 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 GSG1Q2KHT4 349 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 ANKRD20A4Q4UJ75 823 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 ANKRD20A8PQ5CZ79 823 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 ANKRD20A2Q5SQ80 823 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 ANKRD20A1Q5TYW2 823 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 ANKRD20A3Q5VUR7 823 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 ARMC3Q5W041 872 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 Q6ZRG5 221 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 OTOAQ7RTW8 1153 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 OR8H3Q8N146 312 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 SNRNP40Q96DI7 357 aaKnown RBP3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 SPATA17Q96L03 361 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 CXorf58Q96LI9 332 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 CCT8L2Q96SF2 557 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 TTYH2Q9BSA4 534 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 NTMT1Q9BV86 223 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 NUSAP1Q9BXS6 441 aaKnown RBP3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 PLSCR3Q9NRY6 295 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 ABCC13Q9NSE7 274 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 NYAP2Q9P242 653 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 FGD5Q6ZNL6 1462 aa3.22□□□□□ -1.89
RNU4-28P-201ENST00000364739 FAM205AQ6ZU69 1335 aa3.21□□□□□ -1.89
RNU4-28P-201ENST00000364739 P4HA1P13674 534 aa3.21□□□□□ -1.9
RNU4-28P-201ENST00000364739 CPA3P15088 417 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms